HOXB5: Difference between revisions

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<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{Infobox_gene}}
{{PBB_Controls
'''Homeobox protein Hox-B5''' is a [[protein]] that in humans is encoded by the ''HOXB5'' [[gene]].<ref name="pmid1973146">{{cite journal | vauthors = McAlpine PJ, Shows TB | title = Nomenclature for human homeobox genes | journal = Genomics | volume = 7 | issue = 3 | pages = 460 | date = Jul 1990 | pmid = 1973146 | pmc =  | doi = 10.1016/0888-7543(90)90186-X }}</ref><ref name="pmid1358459">{{cite journal | vauthors = Scott MP | title = Vertebrate homeobox gene nomenclature | journal = Cell | volume = 71 | issue = 4 | pages = 551–3 | date = Nov 1992 | pmid = 1358459 | pmc = | doi = 10.1016/0092-8674(92)90588-4 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: HOXB5 homeobox B5| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3215| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}


<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Function ==
{{GNF_Protein_box
| image = PBB_Protein_HOXB5_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1hom.
| PDB = {{PDB2|1hom}}, {{PDB2|1san}}
| Name = Homeobox B5
| HGNCid = 5116
| Symbol = HOXB5
| AltSymbols =; HOX2; HHO.C10; HOX2A; HU-1; Hox2.1
| OMIM = 142960
| ECnumber = 
| Homologene = 37585
| MGIid = 96186
| GeneAtlas_image1 = PBB_GE_HOXB5_205601_s_at_tn.png
| GeneAtlas_image2 = PBB_GE_HOXB5_205600_x_at_tn.png
| Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0043565 |text = sequence-specific DNA binding}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}}
| Process = {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0007275 |text = multicellular organismal development}} {{GNF_GO|id=GO:0009653 |text = anatomical structure morphogenesis}} {{GNF_GO|id=GO:0045446 |text = endothelial cell differentiation}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 3215
    | Hs_Ensembl = ENSG00000120075
    | Hs_RefseqProtein = NP_002138
    | Hs_RefseqmRNA = NM_002147
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 17
    | Hs_GenLoc_start = 44023619
    | Hs_GenLoc_end = 44026322
    | Hs_Uniprot = P09067
    | Mm_EntrezGene = 15413
    | Mm_Ensembl = ENSMUSG00000038700
    | Mm_RefseqmRNA = NM_008268
    | Mm_RefseqProtein = NP_032294
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 11
    | Mm_GenLoc_start = 96119602
    | Mm_GenLoc_end = 96122210
    | Mm_Uniprot = Q9CZV0
  }}
}}
'''Homeobox B5''', also known as '''HOXB5''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: HOXB5 homeobox B5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3215| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
This gene is a member of the Antp homeobox family and encodes a nuclear protein with a homeobox DNA-binding domain. It is included in a cluster of homeobox B genes located on chromosome 17. The encoded protein functions as a sequence-specific transcription factor that is involved in lung and gut development. Increased expression of this gene is associated with a distinct biologic subset of acute myeloid leukemia (AML) and the occurrence of bronchopulmonary sequestration (BPS) and congenital cystic adenomatoid malformation (CCAM) tissue.<ref name="entrez" />
{{PBB_Summary
| section_title =
| summary_text = This gene is a member of the Antp homeobox family and encodes a nuclear protein with a homeobox DNA-binding domain. It is included in a cluster of homeobox B genes located on chromosome 17. The encoded protein functions as a sequence-specific transcription factor that is involved in lung and gut development. Increased expression of this gene is associated with a distinct biologic subset of acute myeloid leukemia (AML) and the occurrence of bronchopulmonary sequestration (BPS) and congenital cystic adenomatoid malformation (CCAM) tissue.<ref name="entrez">{{cite web | title = Entrez Gene: HOXB5 homeobox B5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3215| accessdate = }}</ref>
}}


==See also==
== See also ==
* [[Homeobox]]
* [[Homeobox]]


==References==
== References ==
{{reflist|2}}
{{reflist}}


==Further reading==
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Galang CK, Hauser CA | title = Cooperative DNA binding of the highly conserved human Hox 2.1 homeodomain gene product | journal = The New Biologist | volume = 4 | issue = 5 | pages = 558–68 | date = May 1992 | pmid = 1355360 | doi =  }}
| citations =
* {{cite journal | vauthors = Peverali FA, D'Esposito M, Acampora D, Bunone G, Negri M, Faiella A, Stornaiuolo A, Pannese M, Migliaccio E, Simeone A | title = Expression of HOX homeogenes in human neuroblastoma cell culture lines | journal = Differentiation; Research in Biological Diversity | volume = 45 | issue = 1 | pages = 61–9 | date = Oct 1990 | pmid = 1981366 | doi = 10.1111/j.1432-0436.1990.tb00458.x }}
*{{cite journal | author=Galang CK, Hauser CA |title=Cooperative DNA binding of the highly conserved human Hox 2.1 homeodomain gene product. |journal=New Biol. |volume=4 |issue= 5 |pages= 558-68 |year= 1992 |pmid= 1355360 |doi=  }}
* {{cite journal | vauthors = Giampaolo A, Acampora D, Zappavigna V, Pannese M, D'Esposito M, Carè A, Faiella A, Stornaiuolo A, Russo G, Simeone A | title = Differential expression of human HOX-2 genes along the anterior-posterior axis in embryonic central nervous system | journal = Differentiation; Research in Biological Diversity | volume = 40 | issue = 3 | pages = 191–7 | date = Jun 1989 | pmid = 2570724 | doi = 10.1111/j.1432-0436.1989.tb00598.x }}
*{{cite journal | author=Scott MP |title=Vertebrate homeobox gene nomenclature. |journal=Cell |volume=71 |issue= 4 |pages= 551-3 |year= 1992 |pmid= 1358459 |doi=  }}
* {{cite journal | vauthors = Acampora D, D'Esposito M, Faiella A, Pannese M, Migliaccio E, Morelli F, Stornaiuolo A, Nigro V, Simeone A, Boncinelli E | title = The human HOX gene family | journal = Nucleic Acids Research | volume = 17 | issue = 24 | pages = 10385–402 | date = Dec 1989 | pmid = 2574852 | pmc = 335308 | doi = 10.1093/nar/17.24.10385 }}
*{{cite journal  | author=McAlpine PJ, Shows TB |title=Nomenclature for human homeobox genes. |journal=Genomics |volume=7 |issue= 3 |pages= 460 |year= 1990 |pmid= 1973146 |doi=  }}
* {{cite journal | vauthors = Boncinelli E, Acampora D, Pannese M, D'Esposito M, Somma R, Gaudino G, Stornaiuolo A, Cafiero M, Faiella A, Simeone A | title = Organization of human class I homeobox genes | journal = Genome / National Research Council Canada = Génome / Conseil National De Recherches Canada | volume = 31 | issue = 2 | pages = 745–56 | year = 1990 | pmid = 2576652 | doi = 10.1139/g89-133 }}
*{{cite journal  | author=Peverali FA, D'Esposito M, Acampora D, ''et al.'' |title=Expression of HOX homeogenes in human neuroblastoma cell culture lines. |journal=Differentiation |volume=45 |issue= 1 |pages= 61-9 |year= 1991 |pmid= 1981366 |doi= }}
* {{cite journal | vauthors = Rabin M, Ferguson-Smith A, Hart CP, Ruddle FH | title = Cognate homeo-box loci mapped on homologous human and mouse chromosomes | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 83 | issue = 23 | pages = 9104–8 | date = Dec 1986 | pmid = 2878432 | pmc = 387083 | doi = 10.1073/pnas.83.23.9104 }}
*{{cite journal | author=Giampaolo A, Acampora D, Zappavigna V, ''et al.'' |title=Differential expression of human HOX-2 genes along the anterior-posterior axis in embryonic central nervous system. |journal=Differentiation |volume=40 |issue= 3 |pages= 191-7 |year= 1989 |pmid= 2570724 |doi= }}
* {{cite journal | vauthors = Hart CP, Awgulewitsch A, Fainsod A, McGinnis W, Ruddle FH | title = Homeo box gene complex on mouse chromosome 11: molecular cloning, expression in embryogenesis, and homology to a human homeo box locus | journal = Cell | volume = 43 | issue = 1 | pages = 9–18 | date = Nov 1985 | pmid = 3000607 | doi = 10.1016/0092-8674(85)90007-8 }}
*{{cite journal | author=Acampora D, D'Esposito M, Faiella A, ''et al.'' |title=The human HOX gene family. |journal=Nucleic Acids Res. |volume=17 |issue= 24 |pages= 10385-402 |year= 1990 |pmid= 2574852 |doi= }}
* {{cite journal | vauthors = Xu WM, Gorman PA, Rider SH, Hedge PJ, Moore G, Prichard C, Sheer D, Solomon E | title = Construction of a genetic map of human chromosome 17 by use of chromosome-mediated gene transfer | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 85 | issue = 22 | pages = 8563–7 | date = Nov 1988 | pmid = 3186746 | pmc = 282499 | doi = 10.1073/pnas.85.22.8563 }}
*{{cite journal | author=Boncinelli E, Acampora D, Pannese M, ''et al.'' |title=Organization of human class I homeobox genes. |journal=Genome |volume=31 |issue= 2 |pages= 745-56 |year= 1990 |pmid= 2576652 |doi= }}
* {{cite journal | vauthors = Simeone A, Mavilio F, Bottero L, Giampaolo A, Russo G, Faiella A, Boncinelli E, Peschle C | title = A human homoeo box gene specifically expressed in spinal cord during embryonic development | journal = Nature | volume = 320 | issue = 6064 | pages = 763–5 | year = 1986 | pmid = 3453105 | doi = 10.1038/320763a0 }}
*{{cite journal | author=Rabin M, Ferguson-Smith A, Hart CP, Ruddle FH |title=Cognate homeo-box loci mapped on homologous human and mouse chromosomes. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=83 |issue= 23 |pages= 9104-8 |year= 1987 |pmid= 2878432 |doi= }}
* {{cite journal | vauthors = Hauser CA, Joyner AL, Klein RD, Learned TK, Martin GR, Tjian R | title = Expression of homologous homeo-box-containing genes in differentiated human teratocarcinoma cells and mouse embryos | journal = Cell | volume = 43 | issue = 1 | pages = 19–28 | date = Nov 1985 | pmid = 4075393 | doi = 10.1016/0092-8674(85)90008-X }}
*{{cite journal | author=Hart CP, Awgulewitsch A, Fainsod A, ''et al.'' |title=Homeo box gene complex on mouse chromosome 11: molecular cloning, expression in embryogenesis, and homology to a human homeo box locus. |journal=Cell |volume=43 |issue= 1 |pages= 9-18 |year= 1986 |pmid= 3000607 |doi= }}
* {{cite journal | vauthors = Levine M, Rubin GM, Tjian R | title = Human DNA sequences homologous to a protein coding region conserved between homeotic genes of Drosophila | journal = Cell | volume = 38 | issue = 3 | pages = 667–73 | date = Oct 1984 | pmid = 6091895 | doi = 10.1016/0092-8674(84)90261-7 }}
*{{cite journal | author=Xu WM, Gorman PA, Rider SH, ''et al.'' |title=Construction of a genetic map of human chromosome 17 by use of chromosome-mediated gene transfer. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=85 |issue= 22 |pages= 8563-7 |year= 1988 |pmid= 3186746 |doi= }}
* {{cite journal | vauthors = Galang CK, Hauser CA | title = Cooperative DNA binding of the human HoxB5 (Hox-2.1) protein is under redox regulation in vitro | journal = Molecular and Cellular Biology | volume = 13 | issue = 8 | pages = 4609–17 | date = Aug 1993 | pmid = 8101633 | pmc = 360087 | doi =  10.1128/mcb.13.8.4609}}
*{{cite journal | author=Simeone A, Mavilio F, Bottero L, ''et al.'' |title=A human homoeo box gene specifically expressed in spinal cord during embryonic development. |journal=Nature |volume=320 |issue= 6064 |pages= 763-5 |year= 1986 |pmid= 3453105 |doi= 10.1038/320763a0 }}
* {{cite journal | vauthors = Apiou F, Flagiello D, Cillo C, Malfoy B, Poupon MF, Dutrillaux B | title = Fine mapping of human HOX gene clusters | journal = Cytogenetics and Cell Genetics | volume = 73 | issue = 1-2 | pages = 114–5 | year = 1996 | pmid = 8646877 | doi = 10.1159/000134320 }}
*{{cite journal | author=Hauser CA, Joyner AL, Klein RD, ''et al.'' |title=Expression of homologous homeo-box-containing genes in differentiated human teratocarcinoma cells and mouse embryos. |journal=Cell |volume=43 |issue= 1 |pages= 19-28 |year= 1986 |pmid= 4075393 |doi= }}
* {{cite journal | vauthors = Kuliev A, Kukharenko V, Morozov G, Freidine M, Rechitsky S, Verlinsky O, Ivakhnenko V, Gindilis V, Strom C, Verlinsky Y | title = Expression of homebox-containing genes in human preimplantation development and in embryos with chromosomal aneuploidies | journal = Journal of Assisted Reproduction and Genetics | volume = 13 | issue = 2 | pages = 177–81 | date = Feb 1996 | pmid = 8688592 | doi = 10.1007/BF02072541 }}
*{{cite journal | author=Levine M, Rubin GM, Tjian R |title=Human DNA sequences homologous to a protein coding region conserved between homeotic genes of Drosophila. |journal=Cell |volume=38 |issue= 3 |pages= 667-73 |year= 1984 |pmid= 6091895 |doi= }}
* {{cite journal | vauthors = Sakach M, Safaei R | title = Localization of the HoxB5 protein in the developing CNS of late gestational mouse embryos | journal = International Journal of Developmental Neuroscience | volume = 14 | issue = 5 | pages = 567–73 | date = Aug 1996 | pmid = 8930688 | doi = 10.1016/0736-5748(96)00052-4 }}
*{{cite journal | author=Galang CK, Hauser CA |title=Cooperative DNA binding of the human HoxB5 (Hox-2.1) protein is under redox regulation in vitro. |journal=Mol. Cell. Biol. |volume=13 |issue= 8 |pages= 4609-17 |year= 1993 |pmid= 8101633 |doi=  }}
* {{cite journal | vauthors = Archavachotikul K, Ciccone TJ, Chinoy MR, Nielsen HC, Volpe MV | title = Thyroid hormone affects embryonic mouse lung branching morphogenesis and cellular differentiation | journal = American Journal of Physiology. Lung Cellular and Molecular Physiology | volume = 282 | issue = 3 | pages = L359-69 | date = Mar 2002 | pmid = 11839528 | doi = 10.1152/ajplung.00400.2000 }}
*{{cite journal | author=Apiou F, Flagiello D, Cillo C, ''et al.'' |title=Fine mapping of human HOX gene clusters. |journal=Cytogenet. Cell Genet. |volume=73 |issue= 1-2 |pages= 114-5 |year= 1996 |pmid= 8646877 |doi= }}
* {{cite journal | vauthors = Kosaki K, Kosaki R, Suzuki T, Yoshihashi H, Takahashi T, Sasaki K, Tomita M, McGinnis W, Matsuo N | title = Complete mutation analysis panel of the 39 human HOX genes | journal = Teratology | volume = 65 | issue = 2 | pages = 50–62 | date = Feb 2002 | pmid = 11857506 | doi = 10.1002/tera.10009 }}
*{{cite journal | author=Kuliev A, Kukharenko V, Morozov G, ''et al.'' |title=Expression of homebox-containing genes in human preimplantation development and in embryos with chromosomal aneuploidies. |journal=J. Assist. Reprod. Genet. |volume=13 |issue= 2 |pages= 177-81 |year= 1996 |pmid= 8688592 |doi= }}
*{{cite journal | author=Sakach M, Safaei R |title=Localization of the HoxB5 protein in the developing CNS of late gestational mouse embryos. |journal=Int. J. Dev. Neurosci. |volume=14 |issue= 5 |pages= 567-73 |year= 1997 |pmid= 8930688 |doi= }}
*{{cite journal | author=Archavachotikul K, Ciccone TJ, Chinoy MR, ''et al.'' |title=Thyroid hormone affects embryonic mouse lung branching morphogenesis and cellular differentiation. |journal=Am. J. Physiol. Lung Cell Mol. Physiol. |volume=282 |issue= 3 |pages= L359-69 |year= 2002 |pmid= 11839528 |doi= 10.1152/ajplung.00400.2000 }}
*{{cite journal | author=Kosaki K, Kosaki R, Suzuki T, ''et al.'' |title=Complete mutation analysis panel of the 39 human HOX genes. |journal=Teratology |volume=65 |issue= 2 |pages= 50-62 |year= 2002 |pmid= 11857506 |doi= 10.1002/tera.10009 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
}}
{{refend}}
{{refend}}


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{{NLM content}}
{{NLM content}}
{{protein-stub}}
{{gene-17-stub}}
{{Transcription factors}}
{{PDB Gallery|geneid=3215}}
{{Transcription factors|g3}}
[[Category:Transcription factors]]
[[Category:Transcription factors]]
{{WikiDoc Sources}}

Latest revision as of 02:00, 27 October 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Homeobox protein Hox-B5 is a protein that in humans is encoded by the HOXB5 gene.[1][2][3]

Function

This gene is a member of the Antp homeobox family and encodes a nuclear protein with a homeobox DNA-binding domain. It is included in a cluster of homeobox B genes located on chromosome 17. The encoded protein functions as a sequence-specific transcription factor that is involved in lung and gut development. Increased expression of this gene is associated with a distinct biologic subset of acute myeloid leukemia (AML) and the occurrence of bronchopulmonary sequestration (BPS) and congenital cystic adenomatoid malformation (CCAM) tissue.[3]

See also

References

  1. McAlpine PJ, Shows TB (Jul 1990). "Nomenclature for human homeobox genes". Genomics. 7 (3): 460. doi:10.1016/0888-7543(90)90186-X. PMID 1973146.
  2. Scott MP (Nov 1992). "Vertebrate homeobox gene nomenclature". Cell. 71 (4): 551–3. doi:10.1016/0092-8674(92)90588-4. PMID 1358459.
  3. 3.0 3.1 "Entrez Gene: HOXB5 homeobox B5".

Further reading

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.