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{{WBRQuestion
{{WBRQuestion
|QuestionAuthor={{Rim}}
|QuestionAuthor= {{Rim}} (Reviewed by  {{YD}})
|ExamType=USMLE Step 1
|ExamType=USMLE Step 1
|MainCategory=Biochemistry
|MainCategory=Biochemistry
Line 8: Line 8:
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|SubCategory=General Principles
|SubCategory=General Principles
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
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|MainCategory=Biochemistry
|MainCategory=Biochemistry
|SubCategory=General Principles
|SubCategory=General Principles
|Prompt=An 18 months old boy was noted to have recurrent episodes of ptosis and swallowing difficulty. The episodes last for a couple of days and recur approximately every couple of months. The boy was normal at birth but has had generalized hypotonia throughout his development. Laboratory evaluation reveals lactic acidosis. Genetic studies reveal a defect in the E-1 alpha gene confirming the diagnosis of the patient. Counseling is provided for the parents who were instructed to strictly provide their son with a ketogenic diet. Defect in which of the following enzymes is most likely implicated in this patient's condition?
|Prompt=A 6-months-old boy is brought to the physician's office for irritability and hypotonia. The mother states that she received all her prenatal vitamins and had regular follow-ups with her obstetrician. The boy was delivered abroad, and the family returned to USA 1 week prior to presentation. Her boy was normal at birth, but has had impaired psychomotor development throughout his development, which remained undiagnosed. Laboratory testing is remarkable for lactic acidosis and elevated serum alanine concentration. The physician suspects an inborn error of metabolism, and genetic studies, which demonstrate a defect in the E1 alpha gene, confirm the diagnosis. The parents are advised to maintain a strict diet with high concentrations of leucine and lysine for their child. Which enzyme deficiency is responsible for this patient's condition?
|Explanation=This boy presents with neurological symptoms since infancy in the context of [[lactic acidosis]]. The defect in the E-1 alpha gene points towards the diagnosis of pyruvate dehydrogenase deficiency which is mostly an X-linked disease. There are two main types of presentations of pyruvate dehydrogenase deficiency: a metabolic presentation characterized by severe lactic acidosis at birth, or a chronic neurological presentation characterized by [[hypotonia]], [[lethargy]] and [[mental retardation]].  The treatment of this disease is a strict ketogenic diet high in fat and in the ketogenic amino acids lysine and leucine.  Pyruvate dehydrogenase is also [[thiamine]] responsive.
|Explanation=Pyruvate dehydrogenase (PDH) complex defects are associated with development of irritability, poor feeding, seizures, impaired psychomotor development, lactic acidosis, and elevated serum alanine concentration (accumulated pyruvate is shunted to lactate via LDH and to alanine via ALT). PDH deficiency is a genetic disorder that may be inherited in either an autosomal or X-linked pattern. This patient's diagnosis is first suspected by the findings on physical examination and lab work-up and further confirmed by genetic testing, which demonstrated E1 alpha gene defect. The majority of patients with PDH deficiency have E1 alpha gene defects (PDHA1), which are usually inherited in an X-linked pattern. Management of PDH deficiency includes a strict ketogenic diet (high intake of fat and exclusively ketogenic amino acids lysine and leucine).
 
'''Educational objective:'''
[[Pyruvate dehydrogenase deficiency]] is an X-linked disease caused by a mutation in the E1 alpha subunit of the [[pyruvate dehydrogenase]] complex leading to [[metabolic acidosis]] and neurological symptoms.


'''Reference:'''
Amino acids are either ketogenic or glucogenic. Ketogenic amino acids are amino acids that give rise to fatty acid precursors (acetyl CoA or acetoacetyl CoA) when metabolized. In contrast, glucogenic amino acids are amino acids that give rise to glucose (and consequently pyruvate) or can be converted to glucose (via gluconeogenesis) when metabolized. Only lycine and leucine are strictly ketogenic amino acids. All other amino acids are either only glucogenic or partly ketogenic and partly glucogenic.<br>


de Meirleir, L., Specola, N., Seneca, S., Lissens, W. Pyruvate dehydrogenase E1-alpha deficiency in a family: different clinical presentation in two siblings. J. Inherit. Metab. Dis. 21: 224-226, 1998.<br>
Below is a table that classifies amino acids according to their catabolic class<br>
Brown, G. K., Otero, L. J., LeGris, M., Brown, R. M. Pyruvate dehydrogenase deficiency. J. Med. Genet. 31: 875-879, 1994.<br>
[[Image:Ketogenic and Glucogenic Amino Acids.png|600px]]
First aid for USMLE step 1, 2013.  Page 101.
|AnswerA=Acyl-CoA dehydrogenase
|AnswerA=Acyl-co dehydrogenase
|AnswerAExp=Acyl-CoA dehydrogenase is involved in [[fatty acid]] metabolism.
|AnswerAExp=Acyl-co dehydrogenase is involved in the [[fatty acid]] metabolism.  Deficiency in acyl-co A dehydrogenase leads to elevated levels of dicarboxylic acid and decreased levels of [[glucose]] and [[ketone]]s.  The defect in the E-1 alpha gene points towards the diagnosis of pyruvate dehydrogenase deficiency.
|AnswerB=Alpha-ketoglutarate dehydrogenase
|AnswerB=Alpha ketoglutarate dehydrogenase
|AnswerBExp=Alpha-ketoglutarate dehydrogenase is involved in [[Krebs cycle]].  The defect in the E1 alpha gene in this patient is consistent with the diagnosis of pyruvate dehydrogenase deficiency, not alpha-ketoglutarate dehydrogenase deficiency.
|AnswerBExp=Alpha ketoglutarate dehydrogenase is involved in [[Krebs cycle]].  The defect in the E-1 alpha gene in this patient points towards the diagnosis of pyruvate dehydrogenase deficiency and not alpha ketoglutarate dehydrogenase deficiency.
|AnswerC=Pyruvate dehydrogenase
|AnswerC=Pyruvate dehydrogenase
|AnswerCExp=Pyruvate dehydrogenase links [[glycolysis]] to [[Krebs cycle]]. Pyruvate dehydrogenase is associated with the accumulation of [[pyruvate]] and [[alanine]] as well as with [[lactic acidosis]] as seen in this patient. The defect in the E-1 alpha gene points towards the diagnosis of pyruvate dehydrogenase deficiency.
|AnswerCExp=Pyruvate dehydrogenase links [[glycolysis]] to [[Krebs cycle]]. Pyruvate dehydrogenase deficiency is associated with the accumulation of [[pyruvate]], which is shunted to lactate via LDH and to alanine via ALT. The patient's presentation and the defect in the E1 alpha gene are suggestive of pyruvate dehydrogenase deficiency.
|AnswerD=Branched-chain alpha ketodehydrogenase
|AnswerD=Alpha-keto acid dehydrogenase
|AnswerDExp=Branched-chain alpha ketodehydrogenase is involved in the breakdown of branched amino acids such as [[leucine]], [[isoleucine]] and [[lysine]]. Deficiency in branched-chain alpha ketodehydrogenase is the underlying cause of [[maple syrup disease]].  The defect in the E-1 alpha gene in this patient points towards the diagnosis of pyruvate dehydrogenase deficiency.
|AnswerDExp=Alpha-keto acid dehydrogenase is involved in the breakdown of branched amino acids ([[leucine]], [[isoleucine]], and [[valine]]). Maple syrup urine disease is characterized by alpha-keto acid dehydrogenase deficiency.
|AnswerE=Lactate dehydrogenase
|AnswerE=Lactate dehydrogenase
|AnswerEExp=The defect in the E-1 alpha gene points towards the diagnosis of pyruvate dehydrogenase deficiency and not lactate dehydrogenase.
|AnswerEExp=Lactate dehydrogenase catalyzes the conversion from lactate to pyruvate.
|EducationalObjectives=The majority of patients with PDH deficiency have E1 alpha gene defects (PDHA1), which are usually inherited in an X-linked pattern. Management of PDH deficiency includes a strict ketogenic diet (high intake of fat and exclusively ketogenic amino acids lysine and leucine).
|References=De Meirleir L, Specola N, Seneca S, et al. Pyruvate dehydrogenase E1 alpha deficiency in a family: different clinical presentation in two siblings. J Inherit Metab Dis.1998;21:224-6.<br>
Brown GK, Otero LJ, LeGris M, Brown RM. Pyruvate dehydrogenase deficiency. J Med Genet. 1994;31:875-9.<br>
First Aid 2014 page 102
|RightAnswer=C
|RightAnswer=C
|WBRKeyword=Pyruvate dehydrogenase
|WBRKeyword=Pyruvate dehydrogenase, PDH, Pyruvate dehydrogenase deficiency, PDH deficiency, E1 alpha gene, PDHA1, X-linked, Convulsions, Enzyme, Pyruvate, ALT, Lactate, LDH, Alanine, Leucine, Lycine, Ketogenic diet, Ketogenic amino acids, Pyruvate dehydrogenase complex deficiency, Psychomotor development
|Approved=No
|Approved=Yes
}}
}}

Latest revision as of 02:16, 28 October 2020

 
Author [[PageAuthor::Rim Halaby, M.D. [1] (Reviewed by Yazan Daaboul, M.D.)]]
Exam Type ExamType::USMLE Step 1
Main Category MainCategory::Biochemistry
Sub Category SubCategory::General Principles
Prompt [[Prompt::A 6-months-old boy is brought to the physician's office for irritability and hypotonia. The mother states that she received all her prenatal vitamins and had regular follow-ups with her obstetrician. The boy was delivered abroad, and the family returned to USA 1 week prior to presentation. Her boy was normal at birth, but has had impaired psychomotor development throughout his development, which remained undiagnosed. Laboratory testing is remarkable for lactic acidosis and elevated serum alanine concentration. The physician suspects an inborn error of metabolism, and genetic studies, which demonstrate a defect in the E1 alpha gene, confirm the diagnosis. The parents are advised to maintain a strict diet with high concentrations of leucine and lysine for their child. Which enzyme deficiency is responsible for this patient's condition?]]
Answer A AnswerA::Acyl-CoA dehydrogenase
Answer A Explanation [[AnswerAExp::Acyl-CoA dehydrogenase is involved in fatty acid metabolism.]]
Answer B AnswerB::Alpha-ketoglutarate dehydrogenase
Answer B Explanation [[AnswerBExp::Alpha-ketoglutarate dehydrogenase is involved in Krebs cycle. The defect in the E1 alpha gene in this patient is consistent with the diagnosis of pyruvate dehydrogenase deficiency, not alpha-ketoglutarate dehydrogenase deficiency.]]
Answer C AnswerC::Pyruvate dehydrogenase
Answer C Explanation [[AnswerCExp::Pyruvate dehydrogenase links glycolysis to Krebs cycle. Pyruvate dehydrogenase deficiency is associated with the accumulation of pyruvate, which is shunted to lactate via LDH and to alanine via ALT. The patient's presentation and the defect in the E1 alpha gene are suggestive of pyruvate dehydrogenase deficiency.]]
Answer D AnswerD::Alpha-keto acid dehydrogenase
Answer D Explanation [[AnswerDExp::Alpha-keto acid dehydrogenase is involved in the breakdown of branched amino acids (leucine, isoleucine, and valine). Maple syrup urine disease is characterized by alpha-keto acid dehydrogenase deficiency.]]
Answer E AnswerE::Lactate dehydrogenase
Answer E Explanation AnswerEExp::Lactate dehydrogenase catalyzes the conversion from lactate to pyruvate.
Right Answer RightAnswer::C
Explanation [[Explanation::Pyruvate dehydrogenase (PDH) complex defects are associated with development of irritability, poor feeding, seizures, impaired psychomotor development, lactic acidosis, and elevated serum alanine concentration (accumulated pyruvate is shunted to lactate via LDH and to alanine via ALT). PDH deficiency is a genetic disorder that may be inherited in either an autosomal or X-linked pattern. This patient's diagnosis is first suspected by the findings on physical examination and lab work-up and further confirmed by genetic testing, which demonstrated E1 alpha gene defect. The majority of patients with PDH deficiency have E1 alpha gene defects (PDHA1), which are usually inherited in an X-linked pattern. Management of PDH deficiency includes a strict ketogenic diet (high intake of fat and exclusively ketogenic amino acids lysine and leucine).

Amino acids are either ketogenic or glucogenic. Ketogenic amino acids are amino acids that give rise to fatty acid precursors (acetyl CoA or acetoacetyl CoA) when metabolized. In contrast, glucogenic amino acids are amino acids that give rise to glucose (and consequently pyruvate) or can be converted to glucose (via gluconeogenesis) when metabolized. Only lycine and leucine are strictly ketogenic amino acids. All other amino acids are either only glucogenic or partly ketogenic and partly glucogenic.

Below is a table that classifies amino acids according to their catabolic class

Educational Objective: The majority of patients with PDH deficiency have E1 alpha gene defects (PDHA1), which are usually inherited in an X-linked pattern. Management of PDH deficiency includes a strict ketogenic diet (high intake of fat and exclusively ketogenic amino acids lysine and leucine).
References: De Meirleir L, Specola N, Seneca S, et al. Pyruvate dehydrogenase E1 alpha deficiency in a family: different clinical presentation in two siblings. J Inherit Metab Dis.1998;21:224-6.
Brown GK, Otero LJ, LeGris M, Brown RM. Pyruvate dehydrogenase deficiency. J Med Genet. 1994;31:875-9.
First Aid 2014 page 102]]

Approved Approved::Yes
Keyword WBRKeyword::Pyruvate dehydrogenase, WBRKeyword::PDH, WBRKeyword::Pyruvate dehydrogenase deficiency, WBRKeyword::PDH deficiency, WBRKeyword::E1 alpha gene, WBRKeyword::PDHA1, WBRKeyword::X-linked, WBRKeyword::Convulsions, WBRKeyword::Enzyme, WBRKeyword::Pyruvate, WBRKeyword::ALT, WBRKeyword::Lactate, WBRKeyword::LDH, WBRKeyword::Alanine, WBRKeyword::Leucine, WBRKeyword::Lycine, WBRKeyword::Ketogenic diet, WBRKeyword::Ketogenic amino acids, WBRKeyword::Pyruvate dehydrogenase complex deficiency, WBRKeyword::Psychomotor development
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