Sodium-calcium exchanger: Difference between revisions

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{{protein
{{infobox protein
| Name = solute carrier family 8 (sodium/calcium exchanger), member 1
| Name = solute carrier family 8 (sodium/calcium exchanger), member 1
| caption =  
| caption =
| image =  
| image =
| width =  
| width =
| HGNCid = 11068
| HGNCid = 11068
| Symbol = SLC8A1
| Symbol = SLC8A1
Line 11: Line 11:
| RefSeq = NM_021097
| RefSeq = NM_021097
| UniProt = P32418
| UniProt = P32418
| PDB =  
| PDB =
| ECnumber =  
| ECnumber =
| Chromosome = 2
| Chromosome = 2
| Arm = p
| Arm = p
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| LocusSupplementaryData = -p21
| LocusSupplementaryData = -p21
}}
}}
{{protein
{{infobox protein
| Name = solute carrier family 8 (sodium-calcium exchanger), member 2
| Name = solute carrier family 8 (sodium-calcium exchanger), member 2
| caption =  
| caption =
| image =  
| image =
| width =  
| width =
| HGNCid = 11069
| HGNCid = 11069
| Symbol = SLC8A2
| Symbol = SLC8A2
| AltSymbols =  
| AltSymbols =
| EntrezGene = 6543
| EntrezGene = 6543
| OMIM = 601901
| OMIM = 601901
| RefSeq = NM_015063
| RefSeq = NM_015063
| UniProt = Q9UPR5
| UniProt = Q9UPR5
| PDB =  
| PDB =
| ECnumber =  
| ECnumber =
| Chromosome = 19
| Chromosome = 19
| Arm = q
| Arm = q
| Band = 13.2
| Band = 13.2
| LocusSupplementaryData =  
| LocusSupplementaryData =
}}
}}
{{protein
{{infobox protein
| Name = solute carrier family 8 (sodium-calcium exchanger), member 3
| Name = solute carrier family 8 (sodium-calcium exchanger), member 3
| caption =  
| caption =
| image =  
| image =
| width =  
| width =
| HGNCid = 11070
| HGNCid = 11070
| Symbol = SLC8A3
| Symbol = SLC8A3
| AltSymbols =  
| AltSymbols =
| EntrezGene = 6547
| EntrezGene = 6547
| OMIM = 607991
| OMIM = 607991
| RefSeq = NM_033262
| RefSeq = NM_033262
| UniProt = P57103
| UniProt = P57103
| PDB =  
| PDB =
| ECnumber =  
| ECnumber =
| Chromosome = 14
| Chromosome = 14
| Arm = q
| Arm = q
| Band = 24.1
| Band = 24.1
| LocusSupplementaryData =  
| LocusSupplementaryData =
}}
}}
The '''sodium-calcium exchanger''' (often denoted '''Na<sup>+</sup>/Ca<sup>2+</sup> exchanger''', '''NCX''', or '''exchange protein''') is an [[antiporter]] [[membrane protein]] which removes [[calcium]] from cells. It uses the energy that is stored in the [[electrochemical gradient]] of sodium (Na<sup>+</sup>) by allowing Na<sup>+</sup> to flow down its gradient across the [[plasma membrane]] in exchange for the countertransport of [[calcium in biology|calcium]] ions (Ca<sup>2+</sup>). The NCX removes a single calcium ion in exchange for the import of three sodium ions.<ref name="yuchoi"> {{cite journal | last = Yu | first = SP| authorlink = | coauthors =Choi, DW | title =Na<sup>+</sup>–Ca<sup>2+</sup> exchange currents in cortical neurons: concomitant forward and reverse operation and effect of glutamate | journal =European Journal of Neuroscience | volume =9 | issue =6 | pages =1273-1281 | publisher = | date =1997 | url = | doi = | id =PMID 9215711  | accessdate =2007-01-15 }} </ref> The exchanger exists in many different cell types and animal species.<ref name="Dipolo">Dipolo, R; Beaugé, L (2006). "[http://physrev.physiology.org/cgi/content/abstract/86/1/155 Sodium/calcium exchanger: Influence of metabolic regulation on ion carrier interactions]" ''Physiological Reviews'' '''86''' (1): 155-203. PMID 16371597. Retrieved on [[August 29]], [[2007]].</ref> The NCX is considered one of the most important cellular mechanisms for removing Ca<sup>2+</sup>.<ref name="Dipolo"/>
The '''sodium-calcium exchanger''' (often denoted '''Na<sup>+</sup>/Ca<sup>2+</sup> exchanger''', '''NCX''', or '''exchange protein''') is an [[antiporter]] [[membrane protein]] that removes [[calcium]] from cells. It uses the energy that is stored in the [[electrochemical gradient]] of sodium (Na<sup>+</sup>) by allowing Na<sup>+</sup> to flow down its gradient across the [[plasma membrane]] in exchange for the countertransport of [[calcium in biology|calcium]] ions (Ca<sup>2+</sup>). A single calcium ion is exported for the import of three sodium ions.<ref name="yuchoi">{{cite journal | vauthors = Yu SP, Choi DW | title = Na(+)-Ca2+ exchange currents in cortical neurons: concomitant forward and reverse operation and effect of glutamate | journal = The European Journal of Neuroscience | volume = 9 | issue = 6 | pages = 1273–81 | date = Jun 1997 | pmid = 9215711 | doi = 10.1111/j.1460-9568.1997.tb01482.x }}</ref> The exchanger exists in many different cell types and animal species.<ref name="Dipolo">{{cite journal | vauthors = DiPolo R, Beaugé L | title = Sodium/calcium exchanger: influence of metabolic regulation on ion carrier interactions | journal = Physiological Reviews | volume = 86 | issue = 1 | pages = 155–203 | date = Jan 2006 | pmid = 16371597 | doi = 10.1152/physrev.00018.2005 | url = http://physrev.physiology.org/cgi/content/abstract/86/1/155 }}</ref> The NCX is considered one of the most important cellular mechanisms for removing Ca<sup>2+</sup>.<ref name="Dipolo"/>


The exchanger is usually found in the plasma membranes and the membranes of [[endoplasmic reticulum]] of excitable cells.<ref name="Kiedrowski">{{cite journal | last = Kiedrowski | first = L| authorlink = | coauthors =Brooker, G; Costa, E; Wroblewski, JT | title =Glutamate impairs neuronal calcium extrusion while reducing sodium gradient | journal =Neuron | volume =12 | issue =2 | pages =295-300 | publisher = | date =1994 | url = | doi = | id =PMID 7906528 | accessdate =2007-08-28 }}</ref>
The exchanger is usually found in the plasma membranes and the mitochondria and [[endoplasmic reticulum]] of excitable cells.<ref name="Kiedrowski">{{cite journal | vauthors = Kiedrowski L, Brooker G, Costa E, Wroblewski JT | title = Glutamate impairs neuronal calcium extrusion while reducing sodium gradient | journal = Neuron | volume = 12 | issue = 2 | pages = 295–300 | date = Feb 1994 | pmid = 7906528 | doi = 10.1016/0896-6273(94)90272-0 }}</ref><ref>{{cite journal | vauthors = Patterson M, Sneyd J, Friel DD | title = Depolarization-induced calcium responses in sympathetic neurons: relative contributions from Ca2+ entry, extrusion, ER/mitochondrial Ca2+ uptake and release, and Ca2+ buffering | journal = The Journal of General Physiology | volume = 129 | issue = 1 | pages = 29–56 | date = Jan 2007 | pmid = 17190902 | pmc = 2151609 | doi = 10.1085/jgp.200609660 }}</ref>


==Function==
== Function ==
The Na<sup>+</sup>/Ca<sup>2+</sup> exchanger does not bind very tightly to Ca<sup>2+</sup> (has a low affinity), but it can transport the [[ion]]s rapidly (has a high capacity), transporting up to five thousand Ca2+ ions per second.<ref name="carafoli">{{cite journal | last =Carafoli | first =E | authorlink = | coauthors =Santella, L; Branca, D; Brini, M| title =Generation, control, and processing of cellular calcium signals | journal =Critical Reviews in Biochemistry and Molecular Biology | volume =36 | issue =2 | pages = 107–260| publisher = | date =2001 | url = http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=11370791&query_hl=42&itool=pubmed_docsum| doi = | id = | accessdate =2007-01-09 }}</ref> Therefore it requires large concentrations of Ca<sup>2+</sup> to be effective, but is useful for ridding the cell of large amounts of Ca<sup>2+</sup> in a short time, as is needed in a [[neuron]] after an [[action potential]]. Thus the exchanger also likely plays an important role in regaining the cell's normal calcium concentrations after an [[excitotoxicity|excitotoxic]] insult.<ref name="Kiedrowski"/> Another, more ubiquitous [[transmembrane pump]] that exports calcium from the [[cell (biology)|cell]] is the [[plasma membrane Ca2+ ATPase|Plasma membrane Ca<sup>2+</sup> ATPase]] (PMCA), which has a much higher affinity but a much lower capacity. Since the PMCA is capable of effectively binding to Ca<sup>2+</sup> even when its concentrations are quite low, it is better suited to the task of maintaining the very low concentrations of calcium that are normally within a cell.<ref name="Siegel">{{cite book | last =Siegel | first = GJ| authorlink = | coauthors =Agranoff, BW; Albers, RW; Fisher, SK; Uhler, MD, editors | title =Basic Neurochemistry: Molecular, Cellular, and Medical Aspects. 6th ed | publisher =Lippincott,Williams & Wilkins | date = 1999| location =Philadelphia | pages = | url =http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=books&doptcmdl=GenBookHL&term=PMCA+AND+bnchm%5Bbook%5D+AND+160156%5Buid%5D&rid=bnchm.section.344#345 | doi = | id = }}</ref> Therefore the activities of the NCX and the PMCA complement each other.
The Na<sup>+</sup>/Ca<sup>2+</sup> exchanger does not bind very tightly to Ca<sup>2+</sup> (has a low affinity), but it can transport the [[ion]]s rapidly (has a high capacity), transporting up to five thousand Ca<sup>2+</sup> ions per second.<ref name="carafoli">{{cite journal | vauthors = Carafoli E, Santella L, Branca D, Brini M | title = Generation, control, and processing of cellular calcium signals | journal = Critical Reviews in Biochemistry and Molecular Biology | volume = 36 | issue = 2 | pages = 107–260 | date = Apr 2001 | pmid = 11370791 | doi = 10.1080/20014091074183 }}</ref> Therefore, it requires large concentrations of Ca<sup>2+</sup> to be effective, but is useful for ridding the cell of large amounts of Ca<sup>2+</sup> in a short time, as is needed in a [[neuron]] after an [[action potential]]. Thus, the exchanger also likely plays an important role in regaining the cell's normal calcium concentrations after an [[excitotoxicity|excitotoxic]] insult.<ref name="Kiedrowski"/> Another, more ubiquitous [[transmembrane pump]] that exports calcium from the [[cell (biology)|cell]] is the [[plasma membrane Ca2+ ATPase|plasma membrane Ca<sup>2+</sup> ATPase]] (PMCA), which has a much higher affinity but a much lower capacity. Since the PMCA is capable of effectively binding to Ca<sup>2+</sup> even when its concentrations are quite low, it is better suited to the task of maintaining the very low concentrations of calcium that are normally within a cell.<ref name="Siegel">{{cite book | last=Siegel | first = GJ |author2=Agranoff, BW |author3=Albers, RW |author4=Fisher, SK |author5= Uhler, MD, editors | title=Basic Neurochemistry: Molecular, Cellular, and Medical Aspects |edition=6th | publisher=Lippincott,Williams & Wilkins | year = 1999| location=Philadelphia | url=https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Search&db=books&doptcmdl=GenBookHL&term=PMCA+AND+bnchm%5Bbook%5D+AND+160156%5Buid%5D&rid=bnchm.section.344#345 | isbn=0-7817-0104-X }}</ref> Therefore, the activities of the NCX and the PMCA complement each other.


The exchanger is involved in a variety of cell functions including the following:<ref name="Dipolo"/>
The exchanger is involved in a variety of cell functions including the following:<ref name="Dipolo"/>
*control of [[neurosecretion]]
*control of [[neurosecretion]]
*activity of [[photoreceptor cell]]s
*activity of [[photoreceptor cell]]s
*[[cardiac muscle]] relaxation
*[[Cardiac excitation-contraction coupling|cardiac muscle relaxation]]
*maintenance of Ca<sup>2+</sup> concentration in the [[sarcoplasmic reticulum]] in cardiac cells
*maintenance of Ca<sup>2+</sup> concentration in the [[sarcoplasmic reticulum]] in cardiac cells
*maintenance of Ca<sup>2+</sup> concentration in the endoplasmic reticulum of both excitable and nonexcitable cells
*maintenance of Ca<sup>2+</sup> concentration in the endoplasmic reticulum of both excitable and nonexcitable cells
*[[excitation-contraction coupling]]
*[[excitation-contraction coupling]]
*maintenance of low Ca<sup>2+</sup> concentration in the mitochondria
The exchanger is also implicated in the cardiac electrical conduction abnormality known as [[afterdepolarization|delayed afterdepolarization]].<ref name="Lilly">Lilly, L: "Pathophysiology of Heart Disease", chapter 11: "Mechanisms of Cardiac Arrhythmias", Lippencott, Williams and Wilkens, 2007</ref> It is thought that intracellular accumulation of Ca<sup>2+</sup> causes the activation of the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger. The result is a brief influx of a net positive charge (remember 3 Na<sup>+</sup> in, 1 Ca<sup>2+</sup> out), thereby causing cellular depolarization.<ref name="Lilly"/> This abnormal cellular depolarization can lead to a cardiac arrhythmia.


==Reversibility==
==Reversibility==
Since the transport is [[electrogenicity|electrogenic]] (alters the membrane potential), depolarization of the membrane can reverse the exchanger's direction if the cell is depolarized enough, as may occur in [[excitotoxicity]].<ref name="yuchoi"/> In addition, like other transport proteins, the amount and direction of transport depends on transmembrane substrate gradients.<ref name="yuchoi"/> This fact can be protective because increases in intracellular Ca<sup>2+</sup> concentration that occur in excitotoxicity may activate the exchanger in the forward direction even in the presence of a lowered extracellular Na<sup>+</sup> concentration.<ref name="yuchoi"/> However, it also means that when intracellular levels of Na<sup>+</sup> rise beyond a critical point, the NCX begins importing Ca<sup>2+</sup><ref name="yuchoi"/><ref name="Bindokas  "> {{cite journal | last =Bindokas | first =VP | authorlink = | coauthors =Miller, RJ | title =Excitotoxic degeneration is initiated at non-random sites in cultured rat cerebellar neurons | journal =Journal of Neuroscience | volume =15 | issue =11 | pages =6999-7011 | publisher = | date =1995 | url =http://www.jneurosci.org/cgi/reprint/15/11/6999?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=1&andorexacttitle=and&searchid=1&FIRSTINDEX=0&sortspec=relevance&volume=15&firstpage=6999&resourcetype=HWCIT | doi = | id =PMID 7472456  | accessdate =2007-01-15 }} </ref><ref name="Wolf "> {{cite journal | last =Wolf | first =JA | authorlink = | coauthors =Stys, PK; Lusardi, T; Meaney, D; Smith, DH | title =Traumatic Axonal Injury Induces Calcium Influx Modulated by Tetrodotoxin-Sensitive Sodium Channels | journal =Journal of Neuroscience | volume =21 | issue =6 | pages =1923-1930 | publisher = | date =2001 | url =http://www.jneurosci.org/cgi/content/full/21/6/1923 | doi = | id =PMID 11245677  | accessdate =2007-01-15 }} </ref> The NCX may operate in both forward and reverse directions simultaneously in different areas of the cell, depending on the combined effects of Na<sup>+</sup> and Ca<sup>2+</sup> gradients.<ref name="yuchoi"/>
Since the transport is electrogenic (alters the membrane potential), depolarization of the membrane can reverse the exchanger's direction if the cell is depolarized enough, as may occur in [[excitotoxicity]].<ref name="yuchoi"/> In addition, as with other transport proteins, the amount and direction of transport depends on transmembrane substrate gradients.<ref name="yuchoi"/> This fact can be protective because increases in intracellular Ca<sup>2+</sup> concentration that occur in excitotoxicity may activate the exchanger in the forward direction even in the presence of a lowered extracellular Na<sup>+</sup> concentration.<ref name="yuchoi"/> However, it also means that, when intracellular levels of Na<sup>+</sup> rise beyond a critical point, the NCX begins importing Ca<sup>2+</sup>.<ref name="yuchoi"/><ref>{{cite journal | vauthors = Bindokas VP, Miller RJ | title = Excitotoxic degeneration is initiated at non-random sites in cultured rat cerebellar neurons | journal = The Journal of Neuroscience | volume = 15 | issue = 11 | pages = 6999–7011 | date = Nov 1995 | pmid = 7472456 | url = http://www.jneurosci.org/cgi/reprint/15/11/6999 }}</ref><ref>{{cite journal | vauthors = Wolf JA, Stys PK, Lusardi T, Meaney D, Smith DH | title = Traumatic axonal injury induces calcium influx modulated by tetrodotoxin-sensitive sodium channels | journal = The Journal of Neuroscience | volume = 21 | issue = 6 | pages = 1923–30 | date = Mar 2001 | pmid = 11245677 | url = http://www.jneurosci.org/cgi/content/full/21/6/1923 }}</ref> The NCX may operate in both forward and reverse directions simultaneously in different areas of the cell, depending on the combined effects of Na<sup>+</sup> and Ca<sup>2+</sup> gradients.<ref name="yuchoi"/> This effect may prolong calcium transients following bursts of neuronal activity, thus influencing neuronal information processing.<ref>{{Cite journal|last=Zylbertal|first=Asaph|last2=Kahan|first2=Anat|last3=Ben-Shaul|first3=Yoram|last4=Yarom|first4=Yosef|last5=Wagner|first5=Shlomo|date=2015-12-16|title=Prolonged Intracellular Na+ Dynamics Govern Electrical Activity in Accessory Olfactory Bulb Mitral Cells|url=http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002319|journal=PLOS Biology|volume=13|issue=12|pages=e1002319|doi=10.1371/journal.pbio.1002319|issn=1545-7885|pmc=4684409|pmid=26674618}}</ref><ref>{{Cite journal|last=Scheuss|first=Volker|last2=Yasuda|first2=Ryohei|last3=Sobczyk|first3=Aleksander|last4=Svoboda|first4=Karel|date=2006-08-02|title=Nonlinear [Ca2+] Signaling in Dendrites and Spines Caused by Activity-Dependent Depression of Ca2+ Extrusion|url=http://www.jneurosci.org/content/26/31/8183|journal=Journal of Neuroscience|language=en|volume=26|issue=31|pages=8183–8194|doi=10.1523/JNEUROSCI.1962-06.2006|issn=0270-6474|pmid=16885232}}</ref>
 
===Na<sup>+</sup>/Ca<sup>2+</sup> exchanger in the cardiac action potential===
The ability for the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger to reverse direction of flow manifests itself during the [[cardiac action potential]]. Due to the delicate role that Ca<sup>2+</sup> plays in the contraction of heart muscles, the cellular concentration of Ca<sup>2+</sup> is carefully controlled. During the resting potential, the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger takes advantage of the large extracellular Na+ concentration gradient to help pump Ca<sup>2+</sup> out of the cell.<ref name="nature">{{cite journal | vauthors = Bers DM | title = Cardiac excitation-contraction coupling | journal = Nature | volume = 415 | issue = 6868 | pages = 198–205 | date = Jan 2002 | pmid = 11805843 | doi = 10.1038/415198a | bibcode = 2002Natur.415..198B }}</ref> In fact, the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger is in the Ca<sup>2+</sup> efflux position most of the time. However, during the upstroke of the [[cardiac action potential]] there is a large influx of Na<sup>+</sup> ions. This depolarizes the cell and shifts the membrane potential in the positive direction. What results is a large increase in intracellular [Na<sup>+</sup>]. This causes the reversal of the Na<sup>+</sup>/Ca<sup>2+</sup> exchanger to pump Na<sup>+</sup> ions out of the cell and Ca<sup>2+</sup> ions into the cell.<ref name="nature"/> However, this reversal of the exchanger lasts only momentarily due to the internal rise in [Ca<sup>2+</sup>] as a result of the influx of Ca<sup>2+</sup> through the [[L-type calcium channel]], and the exchanger returns to its forward direction of flow, pumping Ca<sup>2+</sup> out of the cell.<ref name="nature"/>
 
While the exchanger normally works in the Ca<sup>2+</sup> efflux position (with the exception of early in the action potential), certain conditions can abnormally switch the exchanger to the reverse (Ca<sup>2+</sup> influx, Na<sup>+</sup> efflux) position. Listed below are several cellular and pharmaceutical conditions in which this happens.<ref name="nature"/>
*The internal [Na<sup>+</sup>] is higher than usual (like it is when digitalis glycoside medications block the Na<sup>+</sup>/K<sup>+</sup> -ATPase pump.)
*The [[sarcoplasmic reticulum]] release of Ca<sup>2+</sup> is inhibited.
*Other Ca<sup>2+</sup> influx channels are inhibited.
*If the action potential duration is prolonged.
 
==Structure==
Based on [[Protein structure prediction#Secondary structure|secondary structure]] and [[Hydrophobicity scales#Wimley-White whole residue hydrophobicity scales|hydrophobicity predictions]], NCX was initially predicted to have 9 [[Transmembrane domain|transmembrane helices]].<ref>{{cite journal | vauthors = Nicoll DA, Ottolia M, Philipson KD | title = Toward a topological model of the NCX1 exchanger | journal = Annals of the New York Academy of Sciences | volume = 976 | pages = 11–8 | date = Nov 2002 | pmid = 12502529 | doi=10.1111/j.1749-6632.2002.tb04709.x| bibcode = 2002NYASA.976...11N }}</ref> The family is believed to have arisen from a [[gene duplication]] event, due to apparent pseudo-symmetry within the primary sequence of the transmembrane domain.<ref>{{cite journal | vauthors = Cai X, Lytton J | title = The cation/Ca(2+) exchanger superfamily: phylogenetic analysis and structural implications | journal = Molecular Biology and Evolution | volume = 21 | issue = 9 | pages = 1692–703 | date = Sep 2004 | pmid = 15163769 | doi = 10.1093/molbev/msh177 }}</ref> Inserted between the pseudo-symmetric halves is a cytoplasmic loop containing regulatory domains.<ref>{{cite journal | vauthors = Matsuoka S, Nicoll DA, Reilly RF, Hilgemann DW, Philipson KD | title = Initial localization of regulatory regions of the cardiac sarcolemmal Na(+)-Ca2+ exchanger | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 90 | issue = 9 | pages = 3870–4 | date = May 1993 | pmid = 8483905 | doi=10.1073/pnas.90.9.3870 | pmc=46407| bibcode = 1993PNAS...90.3870M }}</ref> These regulatory domains have [[C2 domain]] like structures and are responsible for calcium regulation.<ref>{{cite journal | vauthors = Besserer GM, Ottolia M, Nicoll DA, Chaptal V, Cascio D, Philipson KD, Abramson J | title = The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 104 | issue = 47 | pages = 18467–72 | date = Nov 2007 | pmid = 17962412 | doi = 10.1073/pnas.0707417104 | pmc=2141800| bibcode = 2007PNAS..10418467B }}</ref><ref>{{cite journal | vauthors = Nicoll DA, Sawaya MR, Kwon S, Cascio D, Philipson KD, Abramson J | title = The crystal structure of the primary Ca2+ sensor of the Na+/Ca2+ exchanger reveals a novel Ca2+ binding motif | journal = The Journal of Biological Chemistry | volume = 281 | issue = 31 | pages = 21577–81 | date = Aug 2006 | pmid = 16774926 | doi = 10.1074/jbc.C600117200 }}</ref> Recently, the structure of an [[archaea]]l NCX ortholog has been solved by [[X-ray crystallography]].<ref>{{cite journal | vauthors = Liao J, Li H, Zeng W, Sauer DB, Belmares R, Jiang Y | title = Structural insight into the ion-exchange mechanism of the sodium/calcium exchanger | journal = Science | volume = 335 | issue = 6069 | pages = 686–90 | date = Feb 2012 | pmid = 22323814 | doi = 10.1126/science.1215759 | bibcode = 2012Sci...335..686L }}</ref> This clearly illustrates a [[protein dimer|dimeric]] transporter of 10 transmembrane helices, with a diamond shaped site for substrate binding. Based on the structure and structural symmetry, a model for alternating access with ion competition at the active site was proposed. The structures of three related proton-calcium exhangers (CAX) have been solved from [[Saccharomyces cerevisiae|yeast]] and [[bacteria]]. While structurally and functionally homologus, these structures illustrate novel [[Protein quaternary structure|oligomeric]] structures, substrate coupling, and regulation.<ref>{{cite journal | vauthors = Waight AB, Pedersen BP, Schlessinger A, Bonomi M, Chau BH, Roe-Zurz Z, Risenmay AJ, Sali A, Stroud RM | title = Structural basis for alternating access of a eukaryotic calcium/proton exchanger | journal = Nature | volume = 499 | issue = 7456 | pages = 107–10 | date = Jul 2013 | pmid = 23685453 | pmc = 3702627 | doi = 10.1038/nature12233 | bibcode = 2013Natur.499..107W }}</ref><ref>{{cite journal | vauthors = Nishizawa T, Kita S, Maturana AD, Furuya N, Hirata K, Kasuya G, Ogasawara S, Dohmae N, Iwamoto T, Ishitani R, Nureki O | title = Structural basis for the counter-transport mechanism of a H+/Ca2+ exchanger | journal = Science | volume = 341 | issue = 6142 | pages = 168–72 | date = Jul 2013 | pmid = 23704374 | doi = 10.1126/science.1239002 | bibcode = 2013Sci...341..168N }}</ref><ref>{{cite journal | vauthors = Wu M, Tong S, Waltersperger S, Diederichs K, Wang M, Zheng L | title = Crystal structure of Ca2+/H+ antiporter protein YfkE reveals the mechanisms of Ca2+ efflux and its pH regulation | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 110 | issue = 28 | pages = 11367–72 | date = Jul 2013 | pmid = 23798403 | doi = 10.1073/pnas.1302515110 | bibcode = 2013PNAS..11011367W | pmc=3710832}}</ref>


==History==
==History==
In [[1968]], H Reuter and N Sinz published findings that when Na<sup>+</sup> is removed from the medium surrounding a cell, the efflux of Ca<sup>2+</sup> is inhibited, and they proposed that there might be a mechanism for exchanging the two ions.<ref name="Dipolo"/><ref>Reuter, H; Seitz, N (1968). "[http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=5647333 The dependence of calcium efflux from cardiac muscle on temperature and external ion composition.]" '''195''' (2): 451-470. PMID 5647333. Retrieved on [[August 29]], [[2007]].</ref> In [[1969]], a group led by PF Baker that was experimenting using [[squid axon]]s published a finding that there existed a means of Na<sup>+</sup> exit from cells other than the [[sodium-potassium pump]].<ref name="Dipolo"/><ref>Baker, PF; Blaustein, MP; Hodgkin, AL; and Steinhardt (1969). [http://jp.physoc.org/cgi/content/abstract/200/2/431?ijkey=14f0324350982adb7ad5c35cb24cc388809b4589&keytype2=tf_ipsecsha The influence of calcium on sodium efflux in squid axons]". ''Journal of Physiology'' '''200''' (2): 431-458. Retrieved on [[August 29]], [[2007]].</ref>
In 1968, H Reuter and N Seitz published findings that, when Na<sup>+</sup> is removed from the medium surrounding a cell, the efflux of Ca<sup>2+</sup> is inhibited, and they proposed that there might be a mechanism for exchanging the two ions.<ref name="Dipolo"/><ref>{{cite journal | vauthors = Reuter H, Seitz N | title = The dependence of calcium efflux from cardiac muscle on temperature and external ion composition | journal = The Journal of Physiology | volume = 195 | issue = 2 | pages = 451–70 | date = Mar 1968 | pmid = 5647333 | pmc = 1351672 | doi =  10.1113/jphysiol.1968.sp008467| url = http://www.jphysiol.org/cgi/pmidlookup?view=long&pmid=5647333 }}</ref> In 1969, a group led by PF Baker that was experimenting using [[squid axon]]s published a finding that proposed that there exists a means of Na<sup>+</sup> exit from cells other than the [[sodium-potassium pump]].<ref name="Dipolo"/><ref>{{cite journal | vauthors = Baker PF, Blaustein MP, Hodgkin AL, Steinhardt RA | title = The influence of calcium on sodium efflux in squid axons | journal = The Journal of Physiology | volume = 200 | issue = 2 | pages = 431–58 | date = Feb 1969 | pmid = 5764407 | pmc = 1350476 | url = http://www.jphysiol.org/cgi/pmidlookup?view=long&pmid=5764407 | doi=10.1113/jphysiol.1969.sp008702}}</ref>


==See also==
== See also ==
* [[Active transport]]
* [[Active transport]]
* [[Cardiac action potential]]
* [[Cardiac action potential]]
* [[Potassium-dependent sodium-calcium exchanger]]
* [[Potassium-dependent sodium-calcium exchanger]]


==References==
== References ==
{{reflist|2}}
{{reflist|2}}


==External links==
== External links ==
* {{MeshName|Sodium-calcium+exchanger}}
* {{MeshName|Sodium-calcium+exchanger}}
* {{McGrawHillAnimation|biochemistry|Cotransport}}
* [http://www.cvphysiology.com/Cardiac%20Function/CF023.htm Diagram at cvphysiology.com]
* [http://www.cvphysiology.com/Cardiac%20Function/CF023.htm Diagram at cvphysiology.com]
* Klabunde, RE. 2007. [http://www.cvphysiology.com/Cardiac%20Function/CF023.htm Cardiovascular Physiology Concepts: Calcium Exchange.]
* Klabunde, RE. 2007. [http://www.cvphysiology.com/Cardiac%20Function/CF023.htm Cardiovascular Physiology Concepts: Calcium Exchange.]


{{Ion pumps}}
{{Membrane transport proteins}}
{{Membrane transport proteins}}
[[Category:Transport proteins]]


{{protein-stub}}
[[Category:Solute carrier family]]
{{WikiDoc Sources}}

Latest revision as of 06:17, 10 January 2019

solute carrier family 8 (sodium/calcium exchanger), member 1
Identifiers
SymbolSLC8A1
Alt. symbolsNCX1
Entrez6546
HUGO11068
OMIM182305
RefSeqNM_021097
UniProtP32418
Other data
LocusChr. 2 p23-p21
solute carrier family 8 (sodium-calcium exchanger), member 2
Identifiers
SymbolSLC8A2
Entrez6543
HUGO11069
OMIM601901
RefSeqNM_015063
UniProtQ9UPR5
Other data
LocusChr. 19 q13.2
solute carrier family 8 (sodium-calcium exchanger), member 3
Identifiers
SymbolSLC8A3
Entrez6547
HUGO11070
OMIM607991
RefSeqNM_033262
UniProtP57103
Other data
LocusChr. 14 q24.1

The sodium-calcium exchanger (often denoted Na+/Ca2+ exchanger, NCX, or exchange protein) is an antiporter membrane protein that removes calcium from cells. It uses the energy that is stored in the electrochemical gradient of sodium (Na+) by allowing Na+ to flow down its gradient across the plasma membrane in exchange for the countertransport of calcium ions (Ca2+). A single calcium ion is exported for the import of three sodium ions.[1] The exchanger exists in many different cell types and animal species.[2] The NCX is considered one of the most important cellular mechanisms for removing Ca2+.[2]

The exchanger is usually found in the plasma membranes and the mitochondria and endoplasmic reticulum of excitable cells.[3][4]

Function

The Na+/Ca2+ exchanger does not bind very tightly to Ca2+ (has a low affinity), but it can transport the ions rapidly (has a high capacity), transporting up to five thousand Ca2+ ions per second.[5] Therefore, it requires large concentrations of Ca2+ to be effective, but is useful for ridding the cell of large amounts of Ca2+ in a short time, as is needed in a neuron after an action potential. Thus, the exchanger also likely plays an important role in regaining the cell's normal calcium concentrations after an excitotoxic insult.[3] Another, more ubiquitous transmembrane pump that exports calcium from the cell is the plasma membrane Ca2+ ATPase (PMCA), which has a much higher affinity but a much lower capacity. Since the PMCA is capable of effectively binding to Ca2+ even when its concentrations are quite low, it is better suited to the task of maintaining the very low concentrations of calcium that are normally within a cell.[6] Therefore, the activities of the NCX and the PMCA complement each other.

The exchanger is involved in a variety of cell functions including the following:[2]

The exchanger is also implicated in the cardiac electrical conduction abnormality known as delayed afterdepolarization.[7] It is thought that intracellular accumulation of Ca2+ causes the activation of the Na+/Ca2+ exchanger. The result is a brief influx of a net positive charge (remember 3 Na+ in, 1 Ca2+ out), thereby causing cellular depolarization.[7] This abnormal cellular depolarization can lead to a cardiac arrhythmia.

Reversibility

Since the transport is electrogenic (alters the membrane potential), depolarization of the membrane can reverse the exchanger's direction if the cell is depolarized enough, as may occur in excitotoxicity.[1] In addition, as with other transport proteins, the amount and direction of transport depends on transmembrane substrate gradients.[1] This fact can be protective because increases in intracellular Ca2+ concentration that occur in excitotoxicity may activate the exchanger in the forward direction even in the presence of a lowered extracellular Na+ concentration.[1] However, it also means that, when intracellular levels of Na+ rise beyond a critical point, the NCX begins importing Ca2+.[1][8][9] The NCX may operate in both forward and reverse directions simultaneously in different areas of the cell, depending on the combined effects of Na+ and Ca2+ gradients.[1] This effect may prolong calcium transients following bursts of neuronal activity, thus influencing neuronal information processing.[10][11]

Na+/Ca2+ exchanger in the cardiac action potential

The ability for the Na+/Ca2+ exchanger to reverse direction of flow manifests itself during the cardiac action potential. Due to the delicate role that Ca2+ plays in the contraction of heart muscles, the cellular concentration of Ca2+ is carefully controlled. During the resting potential, the Na+/Ca2+ exchanger takes advantage of the large extracellular Na+ concentration gradient to help pump Ca2+ out of the cell.[12] In fact, the Na+/Ca2+ exchanger is in the Ca2+ efflux position most of the time. However, during the upstroke of the cardiac action potential there is a large influx of Na+ ions. This depolarizes the cell and shifts the membrane potential in the positive direction. What results is a large increase in intracellular [Na+]. This causes the reversal of the Na+/Ca2+ exchanger to pump Na+ ions out of the cell and Ca2+ ions into the cell.[12] However, this reversal of the exchanger lasts only momentarily due to the internal rise in [Ca2+] as a result of the influx of Ca2+ through the L-type calcium channel, and the exchanger returns to its forward direction of flow, pumping Ca2+ out of the cell.[12]

While the exchanger normally works in the Ca2+ efflux position (with the exception of early in the action potential), certain conditions can abnormally switch the exchanger to the reverse (Ca2+ influx, Na+ efflux) position. Listed below are several cellular and pharmaceutical conditions in which this happens.[12]

  • The internal [Na+] is higher than usual (like it is when digitalis glycoside medications block the Na+/K+ -ATPase pump.)
  • The sarcoplasmic reticulum release of Ca2+ is inhibited.
  • Other Ca2+ influx channels are inhibited.
  • If the action potential duration is prolonged.

Structure

Based on secondary structure and hydrophobicity predictions, NCX was initially predicted to have 9 transmembrane helices.[13] The family is believed to have arisen from a gene duplication event, due to apparent pseudo-symmetry within the primary sequence of the transmembrane domain.[14] Inserted between the pseudo-symmetric halves is a cytoplasmic loop containing regulatory domains.[15] These regulatory domains have C2 domain like structures and are responsible for calcium regulation.[16][17] Recently, the structure of an archaeal NCX ortholog has been solved by X-ray crystallography.[18] This clearly illustrates a dimeric transporter of 10 transmembrane helices, with a diamond shaped site for substrate binding. Based on the structure and structural symmetry, a model for alternating access with ion competition at the active site was proposed. The structures of three related proton-calcium exhangers (CAX) have been solved from yeast and bacteria. While structurally and functionally homologus, these structures illustrate novel oligomeric structures, substrate coupling, and regulation.[19][20][21]

History

In 1968, H Reuter and N Seitz published findings that, when Na+ is removed from the medium surrounding a cell, the efflux of Ca2+ is inhibited, and they proposed that there might be a mechanism for exchanging the two ions.[2][22] In 1969, a group led by PF Baker that was experimenting using squid axons published a finding that proposed that there exists a means of Na+ exit from cells other than the sodium-potassium pump.[2][23]

See also

References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Yu SP, Choi DW (Jun 1997). "Na(+)-Ca2+ exchange currents in cortical neurons: concomitant forward and reverse operation and effect of glutamate". The European Journal of Neuroscience. 9 (6): 1273–81. doi:10.1111/j.1460-9568.1997.tb01482.x. PMID 9215711.
  2. 2.0 2.1 2.2 2.3 2.4 DiPolo R, Beaugé L (Jan 2006). "Sodium/calcium exchanger: influence of metabolic regulation on ion carrier interactions". Physiological Reviews. 86 (1): 155–203. doi:10.1152/physrev.00018.2005. PMID 16371597.
  3. 3.0 3.1 Kiedrowski L, Brooker G, Costa E, Wroblewski JT (Feb 1994). "Glutamate impairs neuronal calcium extrusion while reducing sodium gradient". Neuron. 12 (2): 295–300. doi:10.1016/0896-6273(94)90272-0. PMID 7906528.
  4. Patterson M, Sneyd J, Friel DD (Jan 2007). "Depolarization-induced calcium responses in sympathetic neurons: relative contributions from Ca2+ entry, extrusion, ER/mitochondrial Ca2+ uptake and release, and Ca2+ buffering". The Journal of General Physiology. 129 (1): 29–56. doi:10.1085/jgp.200609660. PMC 2151609. PMID 17190902.
  5. Carafoli E, Santella L, Branca D, Brini M (Apr 2001). "Generation, control, and processing of cellular calcium signals". Critical Reviews in Biochemistry and Molecular Biology. 36 (2): 107–260. doi:10.1080/20014091074183. PMID 11370791.
  6. Siegel, GJ; Agranoff, BW; Albers, RW; Fisher, SK; Uhler, MD, editors (1999). Basic Neurochemistry: Molecular, Cellular, and Medical Aspects (6th ed.). Philadelphia: Lippincott,Williams & Wilkins. ISBN 0-7817-0104-X.
  7. 7.0 7.1 Lilly, L: "Pathophysiology of Heart Disease", chapter 11: "Mechanisms of Cardiac Arrhythmias", Lippencott, Williams and Wilkens, 2007
  8. Bindokas VP, Miller RJ (Nov 1995). "Excitotoxic degeneration is initiated at non-random sites in cultured rat cerebellar neurons". The Journal of Neuroscience. 15 (11): 6999–7011. PMID 7472456.
  9. Wolf JA, Stys PK, Lusardi T, Meaney D, Smith DH (Mar 2001). "Traumatic axonal injury induces calcium influx modulated by tetrodotoxin-sensitive sodium channels". The Journal of Neuroscience. 21 (6): 1923–30. PMID 11245677.
  10. Zylbertal, Asaph; Kahan, Anat; Ben-Shaul, Yoram; Yarom, Yosef; Wagner, Shlomo (2015-12-16). "Prolonged Intracellular Na+ Dynamics Govern Electrical Activity in Accessory Olfactory Bulb Mitral Cells". PLOS Biology. 13 (12): e1002319. doi:10.1371/journal.pbio.1002319. ISSN 1545-7885. PMC 4684409. PMID 26674618.
  11. Scheuss, Volker; Yasuda, Ryohei; Sobczyk, Aleksander; Svoboda, Karel (2006-08-02). "Nonlinear [Ca2+] Signaling in Dendrites and Spines Caused by Activity-Dependent Depression of Ca2+ Extrusion". Journal of Neuroscience. 26 (31): 8183–8194. doi:10.1523/JNEUROSCI.1962-06.2006. ISSN 0270-6474. PMID 16885232.
  12. 12.0 12.1 12.2 12.3 Bers DM (Jan 2002). "Cardiac excitation-contraction coupling". Nature. 415 (6868): 198–205. Bibcode:2002Natur.415..198B. doi:10.1038/415198a. PMID 11805843.
  13. Nicoll DA, Ottolia M, Philipson KD (Nov 2002). "Toward a topological model of the NCX1 exchanger". Annals of the New York Academy of Sciences. 976: 11–8. Bibcode:2002NYASA.976...11N. doi:10.1111/j.1749-6632.2002.tb04709.x. PMID 12502529.
  14. Cai X, Lytton J (Sep 2004). "The cation/Ca(2+) exchanger superfamily: phylogenetic analysis and structural implications". Molecular Biology and Evolution. 21 (9): 1692–703. doi:10.1093/molbev/msh177. PMID 15163769.
  15. Matsuoka S, Nicoll DA, Reilly RF, Hilgemann DW, Philipson KD (May 1993). "Initial localization of regulatory regions of the cardiac sarcolemmal Na(+)-Ca2+ exchanger". Proceedings of the National Academy of Sciences of the United States of America. 90 (9): 3870–4. Bibcode:1993PNAS...90.3870M. doi:10.1073/pnas.90.9.3870. PMC 46407. PMID 8483905.
  16. Besserer GM, Ottolia M, Nicoll DA, Chaptal V, Cascio D, Philipson KD, Abramson J (Nov 2007). "The second Ca2+-binding domain of the Na+ Ca2+ exchanger is essential for regulation: crystal structures and mutational analysis". Proceedings of the National Academy of Sciences of the United States of America. 104 (47): 18467–72. Bibcode:2007PNAS..10418467B. doi:10.1073/pnas.0707417104. PMC 2141800. PMID 17962412.
  17. Nicoll DA, Sawaya MR, Kwon S, Cascio D, Philipson KD, Abramson J (Aug 2006). "The crystal structure of the primary Ca2+ sensor of the Na+/Ca2+ exchanger reveals a novel Ca2+ binding motif". The Journal of Biological Chemistry. 281 (31): 21577–81. doi:10.1074/jbc.C600117200. PMID 16774926.
  18. Liao J, Li H, Zeng W, Sauer DB, Belmares R, Jiang Y (Feb 2012). "Structural insight into the ion-exchange mechanism of the sodium/calcium exchanger". Science. 335 (6069): 686–90. Bibcode:2012Sci...335..686L. doi:10.1126/science.1215759. PMID 22323814.
  19. Waight AB, Pedersen BP, Schlessinger A, Bonomi M, Chau BH, Roe-Zurz Z, Risenmay AJ, Sali A, Stroud RM (Jul 2013). "Structural basis for alternating access of a eukaryotic calcium/proton exchanger". Nature. 499 (7456): 107–10. Bibcode:2013Natur.499..107W. doi:10.1038/nature12233. PMC 3702627. PMID 23685453.
  20. Nishizawa T, Kita S, Maturana AD, Furuya N, Hirata K, Kasuya G, Ogasawara S, Dohmae N, Iwamoto T, Ishitani R, Nureki O (Jul 2013). "Structural basis for the counter-transport mechanism of a H+/Ca2+ exchanger". Science. 341 (6142): 168–72. Bibcode:2013Sci...341..168N. doi:10.1126/science.1239002. PMID 23704374.
  21. Wu M, Tong S, Waltersperger S, Diederichs K, Wang M, Zheng L (Jul 2013). "Crystal structure of Ca2+/H+ antiporter protein YfkE reveals the mechanisms of Ca2+ efflux and its pH regulation". Proceedings of the National Academy of Sciences of the United States of America. 110 (28): 11367–72. Bibcode:2013PNAS..11011367W. doi:10.1073/pnas.1302515110. PMC 3710832. PMID 23798403.
  22. Reuter H, Seitz N (Mar 1968). "The dependence of calcium efflux from cardiac muscle on temperature and external ion composition". The Journal of Physiology. 195 (2): 451–70. doi:10.1113/jphysiol.1968.sp008467. PMC 1351672. PMID 5647333.
  23. Baker PF, Blaustein MP, Hodgkin AL, Steinhardt RA (Feb 1969). "The influence of calcium on sodium efflux in squid axons". The Journal of Physiology. 200 (2): 431–58. doi:10.1113/jphysiol.1969.sp008702. PMC 1350476. PMID 5764407.

External links