ABCF1: Difference between revisions

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{{Infobox_gene}}
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'''ATP-binding cassette sub-family F member 1''' is a [[protein]] that in humans is encoded by the ''ABCF1'' [[gene]].<ref name="pmid9790762">{{cite journal | vauthors = Richard M, Drouin R, Beaulieu AD | title = ABC50, a novel human ATP-binding cassette protein found in tumor necrosis factor-alpha-stimulated synoviocytes | journal = Genomics | volume = 53 | issue = 2 | pages = 137–45 |date=Dec 1998 | pmid = 9790762 | pmc = | doi = 10.1006/geno.1998.5480 }}</ref><ref name="entrez"/>
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{{GNF_Protein_box
| image = 
| image_source = 
| PDB =
| Name = ATP-binding cassette, sub-family F (GCN20), member 1
| HGNCid = 70
| Symbol = ABCF1
| AltSymbols =; ABC27; ABC50
| OMIM = 603429
| ECnumber = 
| Homologene = 849
| MGIid = 1351658
| Function = {{GNF_GO|id=GO:0000166 |text = nucleotide binding}} {{GNF_GO|id=GO:0005524 |text = ATP binding}} {{GNF_GO|id=GO:0008135 |text = translation factor activity, nucleic acid binding}} {{GNF_GO|id=GO:0016887 |text = ATPase activity}} {{GNF_GO|id=GO:0042626 |text = ATPase activity, coupled to transmembrane movement of substances}}
| Component =
| Process = {{GNF_GO|id=GO:0006412 |text = translation}} {{GNF_GO|id=GO:0006954 |text = inflammatory response}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 23
    | Hs_Ensembl = ENSG00000204574
    | Hs_RefseqProtein = NP_001020262
    | Hs_RefseqmRNA = NM_001025091
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 6
    | Hs_GenLoc_start = 30647149
    | Hs_GenLoc_end = 30667286
    | Hs_Uniprot = Q8NE71
    | Mm_EntrezGene = 224742
    | Mm_Ensembl = ENSMUSG00000038762
    | Mm_RefseqmRNA = NM_013854
    | Mm_RefseqProtein = NP_038882
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 17
    | Mm_GenLoc_start = 35564872
    | Mm_GenLoc_end = 35577803
    | Mm_Uniprot = A1A4B8
  }}
}}
'''ATP-binding cassette, sub-family F (GCN20), member 1''', also known as '''ABCF1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = The [[protein]] encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various [[molecule]]s across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the GCN20 subfamily. Unlike other members of the superfamily, this protein lacks the transmembrane domains which are characteristic of most ABC transporters. This protein may be regulated by tumor necrosis factor-alpha and play a role in enhancement of protein synthesis and the inflammation process.<ref name="entrez">{{cite web | title = Entrez Gene: ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23| accessdate = }}</ref>
| summary_text = The [[protein]] encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various [[molecule]]s across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the GCN20 subfamily. Unlike other members of the superfamily, this protein lacks the transmembrane domains which are characteristic of most ABC transporters. This protein may be regulated by tumor necrosis factor-alpha and play a role in enhancement of protein synthesis and the inflammation process.<ref name="entrez">{{cite web | title = Entrez Gene: ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23| accessdate = }}</ref>
}}
}}


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==References==
==References==
{{reflist|2}}
{{reflist}}


==Further reading==
==Further reading==
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{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Klein I, Sarkadi B, Váradi A |title=An inventory of the human ABC proteins. |journal=Biochim. Biophys. Acta |volume=1461 |issue= 2 |pages= 237-62 |year= 2000 |pmid= 10581359 |doi=  }}
*{{cite journal  | vauthors=Klein I, Sarkadi B, Váradi A |title=An inventory of the human ABC proteins. |journal=Biochim. Biophys. Acta |volume=1461 |issue= 2 |pages= 237–62 |year= 2000 |pmid= 10581359 |doi=  10.1016/s0005-2736(99)00161-3}}
*{{cite journal  | author=You KT, Li LS, Kim NG, ''et al.'' |title=Selective translational repression of truncated proteins from frameshift mutation-derived mRNAs in tumors. |journal=PLoS Biol. |volume=5 |issue= 5 |pages= e109 |year= 2007 |pmid= 17456004 |doi= 10.1371/journal.pbio.0050109 }}
*{{cite journal  | vauthors=You KT, Li LS, Kim NG |title=Selective Translational Repression of Truncated Proteins from Frameshift Mutation-Derived mRNAs in Tumors |journal=PLoS Biol. |volume=5 |issue= 5 |pages= e109 |year= 2007 |pmid= 17456004 |doi= 10.1371/journal.pbio.0050109 | pmc=1854916 |display-authors=etal}}
*{{cite journal  | author=Ota M, Katsuyama Y, Hamano H, ''et al.'' |title=Two critical genes (HLA-DRB1 and ABCF1)in the HLA region are associated with the susceptibility to autoimmune pancreatitis. |journal=Immunogenetics |volume=59 |issue= 1 |pages= 45-52 |year= 2007 |pmid= 17119950 |doi= 10.1007/s00251-006-0178-2 }}
*{{cite journal  | vauthors=Ota M, Katsuyama Y, Hamano H |title=Two critical genes (HLA-DRB1 and ABCF1)in the HLA region are associated with the susceptibility to autoimmune pancreatitis |journal=Immunogenetics |volume=59 |issue= 1 |pages= 45–52 |year= 2007 |pmid= 17119950 |doi= 10.1007/s00251-006-0178-2 |display-authors=etal}}
*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
*{{cite journal  | vauthors=Olsen JV, Blagoev B, Gnad F |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks |journal=Cell |volume=127 |issue= 3 |pages= 635–48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 |display-authors=etal}}
*{{cite journal  | author=Beausoleil SA, Villén J, Gerber SA, ''et al.'' |title=A probability-based approach for high-throughput protein phosphorylation analysis and site localization. |journal=Nat. Biotechnol. |volume=24 |issue= 10 |pages= 1285-92 |year= 2006 |pmid= 16964243 |doi= 10.1038/nbt1240 }}
*{{cite journal  | vauthors=Beausoleil SA, Villén J, Gerber SA |title=A probability-based approach for high-throughput protein phosphorylation analysis and site localization |journal=Nat. Biotechnol. |volume=24 |issue= 10 |pages= 1285–92 |year= 2006 |pmid= 16964243 |doi= 10.1038/nbt1240 |display-authors=etal}}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}}
*{{cite journal  | author=Ballif BA, Villén J, Beausoleil SA, ''et al.'' |title=Phosphoproteomic analysis of the developing mouse brain. |journal=Mol. Cell Proteomics |volume=3 |issue= 11 |pages= 1093-101 |year= 2005 |pmid= 15345747 |doi= 10.1074/mcp.M400085-MCP200 }}
*{{cite journal  | vauthors=Ballif BA, Villén J, Beausoleil SA |title=Phosphoproteomic analysis of the developing mouse brain |journal=Mol. Cell. Proteomics |volume=3 |issue= 11 |pages= 1093–101 |year= 2005 |pmid= 15345747 |doi= 10.1074/mcp.M400085-MCP200 |display-authors=etal}}
*{{cite journal  | author=Beausoleil SA, Jedrychowski M, Schwartz D, ''et al.'' |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130-5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 }}
*{{cite journal  | vauthors=Beausoleil SA, Jedrychowski M, Schwartz D |title=Large-scale characterization of HeLa cell nuclear phosphoproteins |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 | pmc=514446 |display-authors=etal}}
*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal  | vauthors=Mungall AJ, Palmer SA, Sims SK |title=The DNA sequence and analysis of human chromosome 6 |journal=Nature |volume=425 |issue= 6960 |pages= 805–11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 |display-authors=etal}}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |display-authors=etal}}
*{{cite journal  | author=Tyzack JK, Wang X, Belsham GJ, Proud CG |title=ABC50 interacts with eukaryotic initiation factor 2 and associates with the ribosome in an ATP-dependent manner. |journal=J. Biol. Chem. |volume=275 |issue= 44 |pages= 34131-9 |year= 2000 |pmid= 10931828 |doi= 10.1074/jbc.M002868200 }}
*{{cite journal  | vauthors=Tyzack JK, Wang X, Belsham GJ, Proud CG |title=ABC50 interacts with eukaryotic initiation factor 2 and associates with the ribosome in an ATP-dependent manner |journal=J. Biol. Chem. |volume=275 |issue= 44 |pages= 34131–9 |year= 2000 |pmid= 10931828 |doi= 10.1074/jbc.M002868200 }}
*{{cite journal  | author=Richard M, Drouin R, Beaulieu AD |title=ABC50, a novel human ATP-binding cassette protein found in tumor necrosis factor-alpha-stimulated synoviocytes. |journal=Genomics |volume=53 |issue= 2 |pages= 137-45 |year= 1998 |pmid= 9790762 |doi= 10.1006/geno.1998.5480 }}
}}
}}
{{refend}}
{{refend}}
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== External links ==
== External links ==
* {{MeshName|ABCF1+protein,+human}}
* {{MeshName|ABCF1+protein,+human}}
* {{UCSC gene info|ABCF1}}


{{membrane-protein-stub}}
{{NLM content}}
{{NLM content}}
{{Membrane transport proteins}}
{{ABC transporters}}
 
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{{DEFAULTSORT:Abcf1}}
[[Category:ABC transporters]]
[[Category:ABC transporters]]
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{{membrane-protein-stub}}

Latest revision as of 17:40, 29 August 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
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Wikidata
View/Edit Human

ATP-binding cassette sub-family F member 1 is a protein that in humans is encoded by the ABCF1 gene.[1][2]

The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the GCN20 subfamily. Unlike other members of the superfamily, this protein lacks the transmembrane domains which are characteristic of most ABC transporters. This protein may be regulated by tumor necrosis factor-alpha and play a role in enhancement of protein synthesis and the inflammation process.[2]

See also

References

  1. ↑ Richard M, Drouin R, Beaulieu AD (Dec 1998). "ABC50, a novel human ATP-binding cassette protein found in tumor necrosis factor-alpha-stimulated synoviocytes". Genomics. 53 (2): 137–45. doi:10.1006/geno.1998.5480. PMID 9790762.
  2. ↑ 2.0 2.1 "Entrez Gene: ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1".

Further reading

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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