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{{WBRQuestion
{{WBRQuestion
|QuestionAuthor=William J Gibson
|QuestionAuthor=William J Gibson (Reviewed by Serge Korjian)
|ExamType=USMLE Step 1
|ExamType=USMLE Step 1
|MainCategory=Biochemistry
|MainCategory=Biochemistry
Line 8: Line 8:
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|SubCategory=Hematology, General Principles
|SubCategory=Hematology, General Principles
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
|MainCategory=Biochemistry
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|MainCategory=Biochemistry
|MainCategory=Biochemistry
|SubCategory=Hematology, General Principles
|SubCategory=Hematology, General Principles
|Prompt=Lenolidamide is a highly effective chemotherapy against multiple myeloma. A scientist is investigating the anti-neoplatic mechanism of lenolidamide.  She finds that addition of lenolidamide to multiple myeloma cells decreases the protein abundance of the plasma cell essential transcription factors IKZF1 and IKZF3. She finds that lenolidamide binds to the CRBN-CRL4 complex, which then induces a post-translational modification of IKZF1 and IKZF3. Which of the following enzymatic activities does CRBN-CRL4 most likely possess?
|Prompt=Lenalidomide is a highly effective chemotherapeutic agent against multiple myeloma. A scientist is investigating the anti-neoplatic mechanism of lenalidomide.  She finds that addition of lenalidomide to multiple myeloma cells decreases the protein abundance of the plasma cell essential transcription factors IKZF1 and IKZF3. She finds that lenalidomide binds to the CRBN-CRL4 complex, which then induces a post-translational modification of IKZF1 and IKZF3. Which of the following enzymatic activities does CRBN-CRL4 most likely possess?
|Explanation=In this question we are given that upon addition of lenolidamide, two transcription factors are post-translationally modified and then degraded. Thus, we need to find the post-translational modification that induces degradation of proteins: ubiquitination.
|Explanation=Upon addition of lenalidomide, two transcription factors are post-translationally modified and their abundance is shown to decrease i.e. they are most likely degraded. The post-translational modification that induces degradation of proteins is polyubiquitination. Ubiquitination is a process whereby ubiquitin is attached to a substrate protein leading to several downstream effects. Polyubiquitination, or the addition of multiple ubiquitin molecules in a chain to a certain protein, targets the protein for degradation by the proteasome, an enzymatic complex that breaks down unneeded proteins via proteolysis. It is important to note that not every addition of a ubiquitin molecule to a protein tags the latter for degradation, this process only occurs with polyubiquitination. Ubiquitination requires three main enzymes ubiquitin-activating enzyme (E1), ubiquitin-conjugating enzyme (E2), and ubiquitin ligase (E3). The process is demonstrated below.
 
Ubiquitination is a post translational modification (an addition to a protein after it has been made) where ubiquitin is attached to a substrate protein. The addition of ubiquitin to proteins signals for the degradation of the protein by the proteasome.
 
Educational Objective: Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
 
References:
First Aid 2012 page 78
First Aid 2013 page 73
 
Lu G, Middleton RE, Sun H, et al. The Myeloma Drug Lenalidomide Promotes the Cereblon-Dependent Destruction of Ikaros Proteins. Science. 2013;


[[File:Ubiquitination.png]]
|AnswerA=Glycosyltransferase
|AnswerA=Glycosyltransferase
|AnswerAExp=Incorrect: Glycosylation refers to the addition of a carbohydrate to a protein. The glycosylation of proteins does not target them for degradation. Glycosylation is often necessary for the proper function or folding of the modified protein.  One example of a heavily glycosylated protein family is the heparin sulfate proteoglycans.
|AnswerAExp=Glycosylation refers to the addition of a carbohydrate to a protein. The glycosylation of proteins does not target them for degradation. Glycosylation is often necessary for the proper function or folding of the modified protein.  One example of a heavily glycosylated protein family is the heparin sulfate proteoglycans.
|AnswerB=Farnesyltransferase
|AnswerB=Farnesyltransferase
|AnswerBExp=Incorrect: Farnesyl groups can be added to proteins for their proper localization to cell membranes.  Farnesylation does not target proteins for degradation.
|AnswerBExp=Farnesyl groups can be added to proteins for their proper localization to cell membranes.  Farnesylation does not target proteins for degradation.
|AnswerC=Gamma-carboxylase
|AnswerC=Gamma-carboxylase
|AnswerCExp=Incorrect:  Vitamin K is gamma-carboxylated for its normal function.
|AnswerCExp=Vitamin K is gamma-carboxylated for its normal function.
|AnswerD=Hydroxylase
|AnswerD=Hydroxylase
|AnswerDExp=Incorrect: Hydroxylation refers to the addition of an –OH group to a compound.  Hydroxylation is an important step in the synthesis of steroid compounds.  Proline hydroxylation is accomplished with Vitamin C as a cofactor in the synthesis of collagen.
|AnswerDExp=Hydroxylation refers to the addition of an –OH group to a compound.  Hydroxylation is an important step in the synthesis of steroid compounds.  Proline hydroxylation is accomplished with Vitamin C as a cofactor in the synthesis of collagen.
|AnswerE=Ubiquitin ligase
|AnswerE=Ubiquitin ligase
|AnswerEExp=Correct:  Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
|AnswerEExp=Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
|EducationalObjectives=Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
|References=Lu G, Middleton RE, Sun H, et al. The myeloma drug lenalidomide promotes the cereblon-dependent destruction of Ikaros proteins. Science. 2014;343(6168):305-9.<br>
'''Image Atrribution:''' Roger B. Dodd
|RightAnswer=E
|RightAnswer=E
|WBRKeyword=Ubiquitin, Post-translational modification, Protein, Translation, Molecular biology, Cell
|WBRKeyword=Ubiquitin, Post-translational modification, Protein, Translation, Molecular biology, Cell
|Approved=Yes
|Approved=Yes
}}
}}

Latest revision as of 02:07, 28 October 2020

 
Author PageAuthor::William J Gibson (Reviewed by Serge Korjian)
Exam Type ExamType::USMLE Step 1
Main Category MainCategory::Biochemistry
Sub Category SubCategory::Hematology, SubCategory::General Principles
Prompt [[Prompt::Lenalidomide is a highly effective chemotherapeutic agent against multiple myeloma. A scientist is investigating the anti-neoplatic mechanism of lenalidomide. She finds that addition of lenalidomide to multiple myeloma cells decreases the protein abundance of the plasma cell essential transcription factors IKZF1 and IKZF3. She finds that lenalidomide binds to the CRBN-CRL4 complex, which then induces a post-translational modification of IKZF1 and IKZF3. Which of the following enzymatic activities does CRBN-CRL4 most likely possess?]]
Answer A AnswerA::Glycosyltransferase
Answer A Explanation [[AnswerAExp::Glycosylation refers to the addition of a carbohydrate to a protein. The glycosylation of proteins does not target them for degradation. Glycosylation is often necessary for the proper function or folding of the modified protein. One example of a heavily glycosylated protein family is the heparin sulfate proteoglycans.]]
Answer B AnswerB::Farnesyltransferase
Answer B Explanation AnswerBExp::Farnesyl groups can be added to proteins for their proper localization to cell membranes. Farnesylation does not target proteins for degradation.
Answer C AnswerC::Gamma-carboxylase
Answer C Explanation AnswerCExp::Vitamin K is gamma-carboxylated for its normal function.
Answer D AnswerD::Hydroxylase
Answer D Explanation AnswerDExp::Hydroxylation refers to the addition of an –OH group to a compound. Hydroxylation is an important step in the synthesis of steroid compounds. Proline hydroxylation is accomplished with Vitamin C as a cofactor in the synthesis of collagen.
Answer E AnswerE::Ubiquitin ligase
Answer E Explanation AnswerEExp::Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
Right Answer RightAnswer::E
Explanation [[Explanation::Upon addition of lenalidomide, two transcription factors are post-translationally modified and their abundance is shown to decrease i.e. they are most likely degraded. The post-translational modification that induces degradation of proteins is polyubiquitination. Ubiquitination is a process whereby ubiquitin is attached to a substrate protein leading to several downstream effects. Polyubiquitination, or the addition of multiple ubiquitin molecules in a chain to a certain protein, targets the protein for degradation by the proteasome, an enzymatic complex that breaks down unneeded proteins via proteolysis. It is important to note that not every addition of a ubiquitin molecule to a protein tags the latter for degradation, this process only occurs with polyubiquitination. Ubiquitination requires three main enzymes ubiquitin-activating enzyme (E1), ubiquitin-conjugating enzyme (E2), and ubiquitin ligase (E3). The process is demonstrated below.


Educational Objective: Proteins can be targeted for degradation by the addition of ubiquitin molecules to lysine residues.
References: Lu G, Middleton RE, Sun H, et al. The myeloma drug lenalidomide promotes the cereblon-dependent destruction of Ikaros proteins. Science. 2014;343(6168):305-9.
Image Atrribution: Roger B. Dodd]]

Approved Approved::Yes
Keyword WBRKeyword::Ubiquitin, WBRKeyword::Post-translational modification, WBRKeyword::Protein, WBRKeyword::Translation, WBRKeyword::Molecular biology, WBRKeyword::Cell
Linked Question Linked::
Order in Linked Questions LinkedOrder::