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{{Underlinked|date=June 2016}}
{{Infobox protein|name=SLITRK1|AltNames=KIAA1910, LRRC12, UNQ233/PRO266|image=|width=|caption=|Symbol=SLITRK1|AltSymbols=|IUPHAR_id=|ATC_prefix=|ATC_suffix=|ATC_supplemental=|CAS_number=|CAS_supplemental=|DrugBank=|EntrezGene=114798|HGNCid=20297|OMIM=609678|PDB=4RCW|RefSeq=|UniProt=Q96PX8|EC_number=|Chromosome=13|Arm=q|Band=31.1|LocusSupplementaryData=}}
{{Infobox_gene}}
'''SLIT and NTRK-like protein 1''' is a [[protein]] that in humans is encoded by the ''SLITRK1'' [[gene]].<ref name="pmid14557068">{{cite journal | vauthors = Aruga J, Yokota N, Mikoshiba K | title = Human SLITRK family genes: genomic organization and expression profiling in normal brain and brain tumor tissue | journal = Gene | volume = 315 | issue = | pages = 87–94 |date=Oct 2003 | pmid = 14557068 | pmc = | doi =10.1016/S0378-1119(03)00715-7  }}</ref><ref name="pmid12975309">{{cite journal | vauthors = Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A | title = The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment | journal = Genome Res | volume = 13 | issue = 10 | pages = 2265–70 |date=Oct 2003 | pmid = 12975309 | pmc = 403697 | doi = 10.1101/gr.1293003 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SLITRK1 SLIT and NTRK-like family, member 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=114798| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
'''SLITRK1''' ("SLIT and NTRK-like family, member 1")  is a human [[gene]] that codes for a transmembrane and signalling protein that is part of the SLITRK gene family, which is responsible for [[synapse]] regulation and presynaptic differentiation in the brain.<ref name=":0">{{cite journal | vauthors = Beaubien F, Raja R, Kennedy TE, Fournier AE, Cloutier JF | title = Slitrk1 is localized to excitatory synapses and promotes their development | journal = Scientific Reports | volume = 6 | pages = 27343 | date = June 2016 | pmid = 27273464 | pmc = 4895136 | doi = 10.1038/srep27343 }}</ref><ref name=":1">{{cite journal | vauthors = Um JW, Kim KH, Park BS, Choi Y, Kim D, Kim CY, Kim SJ, Kim M, Ko JS, Lee SG, Choii G, Nam J, Heo WD, Kim E, Lee JO, Ko J, Kim HM | title = Structural basis for LAR-RPTP/Slitrk complex-mediated synaptic adhesion | journal = Nature Communications | volume = 5 | pages = 5423 | date = November 2014 | pmid = 25394468 | doi = 10.1038/ncomms6423 }}</ref><ref name=":5">{{cite journal | vauthors = Chattopadhyay K, Chatterjee K | title = The genetic factors influencing the development of trichotillomania | journal = Journal of Genetics | volume = 91 | issue = 2 | pages = 259–62 | date = August 2012 | pmid = 22942103 }}</ref> Expression of the gene has been linked to early formation of excitatory synapses through binding with receptor tyrosine phosphatase PTP (LAR-RPTP).<ref name=":0" /><ref name=":1" /> Various studies over the years have linked mutations in the gene to conditions on the OCD spectrum, [[Tourette syndrome]] and [[trichotillomania]], however the mutations in the genome itself vary greatly between individuals, with most mutations observed being hard to find in repeat studies.
{{PBB_Summary
| section_title =  
| summary_text = Members of the SLITRK family, such as SLITRK1, are integral membrane proteins with 2 N-terminal leucine-rich repeat (LRR) domains similar to those of SLIT proteins (see SLIT1; MIM 603742). Most SLITRKs, but not SLITRK1, also have C-terminal regions that share homology with neurotrophin receptors (see NTRK1; MIM 191315). SLITRKs are expressed predominantly in neural tissues and have neurite-modulating activity (Aruga et al., 2003).[supplied by OMIM]<ref name="entrez" />
}}


==References==
== Gene ==
{{reflist}}
The gene for SLITRK1 is located on chromosome 13q31.1. The gene is expressed only in the brain of humans. The mRNA can differ from alternative splicing, and contains domains for the extracellular matrix as well as for the LRRs.<ref name=":8" /><ref name=":7" /> Mice contain an ortholog of the gene called Slitrk1.<ref name=":8">{{Cite web|url=https://www.ncbi.nlm.nih.gov/gene/114798|title=SLITRK1 SLIT and NTRK like family member 1 [Homo sapiens (human)] - Gene - NCBI|website=www.ncbi.nlm.nih.gov|access-date=2017-11-30}}</ref>


==Further reading==
== Protein structure ==
{{refbegin | 2}}
SLITRK1 contains 2 horseshoe shaped leucine rich repeat domains ([[Leucine-rich repeat|LRRs]]) in its extracellular domain which are vital to its function.<ref name=":0" /> The LRRs have 6 modules each and are connected by a 70-90 amino acid loops.<ref name=":1" /> LRR1 is a more conserved sequence and is present as a dimer while LRR2 is a monomer and has a more variable sequence.<ref name=":1" /> The conserved sequence of LRR1 contains critical binding pockets and specific charged residues that are important for it to carry out its function of binding to LAR-RPTPs on the N-terminus.<ref name=":0" /><ref name=":1" /> Both LRR sequences are randomly positioned on the protein and contain variable linker regions.<ref name=":1" /> The protein also contains a short intracellular domain, but lacks a tyrosine phosphorylation motif which is present in other SLITRK genes.<ref name=":3">{{cite journal | vauthors = Karagiannidis I, Rizzo R, Tarnok Z, Wolanczyk T, Hebebrand J, Nöthen MM, Lehmkuhl G, Farkas L, Nagy P, Barta C, Szymanska U, Panteloglou G, Miranda DM, Feng Y, Sandor P, Barr C, Paschou P | title = Replication of association between a SLITRK1 haplotype and Tourette Syndrome in a large sample of families | journal = Molecular Psychiatry | volume = 17 | issue = 7 | pages = 665–8 | date = July 2012 | pmid = 22083730 | doi = 10.1038/mp.2011.151 }}</ref>
{{PBB_Further_reading
| citations =
*{{cite journal  | vauthors=Nagase T, Kikuno R, Ohara O |title=Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. |journal=DNA Res. |volume=8 |issue= 4 |pages= 179–87 |year= 2002 |pmid= 11572484 |doi=10.1093/dnares/8.4.179  }}
*{{cite journal  |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
*{{cite journal  | vauthors=Aruga J, Mikoshiba K |title=Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth. |journal=Mol. Cell. Neurosci. |volume=24 |issue= 1 |pages= 117–29 |year= 2004 |pmid= 14550773 |doi=10.1016/S1044-7431(03)00129-5  }}
*{{cite journal  |vauthors=Dunham A, Matthews LH, Burton J, etal |title=The DNA sequence and analysis of human chromosome 13. |journal=Nature |volume=428 |issue= 6982 |pages= 522–8 |year= 2004 |pmid= 15057823 |doi= 10.1038/nature02379  | pmc=2665288 }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
*{{cite journal  |vauthors=Abelson JF, Kwan KY, O'Roak BJ, etal |title=Sequence variants in SLITRK1 are associated with Tourette's syndrome. |journal=Science |volume=310 |issue= 5746 |pages= 317–20 |year= 2005 |pmid= 16224024 |doi= 10.1126/science.1116502 }}
*{{cite journal  | author=Burton A |title=SLITRK1 trouble in Tourette's syndrome. |journal=Lancet Neurology |volume=4 |issue= 12 |pages= 801 |year= 2006 |pmid= 16323357 |doi=10.1016/S1474-4422(05)70242-8  }}
*{{cite journal  | vauthors=Wendland JR, Kruse MR, Murphy DL |title=Functional SLITRK1 var321, varCDfs and SLC6A4 G56A variants and susceptibility to obsessive-compulsive disorder. |journal=Mol. Psychiatry |volume=11 |issue= 9 |pages= 802–4 |year= 2006 |pmid= 16936762 |doi= 10.1038/sj.mp.4001848 }}
*{{cite journal  |vauthors=Zuchner S, Cuccaro ML, Tran-Viet KN, etal |title=SLITRK1 mutations in trichotillomania. |journal=Mol. Psychiatry |volume=11 |issue= 10 |pages= 887–9 |year= 2006 |pmid= 17003809 |doi= 10.1038/sj.mp.4001865 }}
}}
{{refend}}


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== Function ==
{{PBB_Controls
SLITKR1 is highly expressed in the [[central nervous system]].<ref name=":0" /> It plays a critical part in regulating synapse formation between hippocampal neurons and in differentiation of synapses, helping in neuronal outgrowth.<ref name=":0" /><ref name=":1" /><ref name=":3" /><ref name=":6">{{cite journal | vauthors = Ozomaro U, Cai G, Kajiwara Y, Yoon S, Makarov V, Delorme R, Betancur C, Ruhrmann S, Falkai P, Grabe HJ, Maier W, Wagner M, Lennertz L, Moessner R, Murphy DL, Buxbaum JD, Züchner S, Grice DE | title = Characterization of SLITRK1 variation in obsessive-compulsive disorder | journal = PLOS One | volume = 8 | issue = 8 | pages = e70376 | date = 2013 | pmid = 23990902 | pmc = 3749144 | doi = 10.1371/journal.pone.0070376 }}</ref> It is expressed during embryonic stages and postnatally but expression decreases over time and is localized to the postsynaptic membrane.<ref name=":0" /><ref name=":1" />
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Overexpression of SLITKR1 promotes postsynaptic differentiation for excitatory and inhibitory synapses, but because of the localization only excitatory synapses are affected.<ref name=":0" /> Inhibition of SLITKR1 only reduces differentiation of excitatory synapses because of this.<ref name=":0" />


{{gene-13-stub}}
=== Interaction with LAR-RPTP ===
Since they lack tyrosine phosphorylation motifs, SLITKR1 binds to LAR-RPTP through its LRR1 region in order to differentiate synapses.<ref name=":0" /><ref name=":1" /> The LRR2 domain's function is not clearly understood yet but it is hypothesised that it is for dimerization to the cell surface.<ref name=":0" />
 
LAR-RPTP binds to the LRR1 region through its PTPδ Ig region, with 3 separate binding sites in a 1:1 binding ratio.<ref name=":1" /> Ig1 binds through electrostatic and hydrophobic interactions, Ig2 binds through ionic and hydrogen bonds, and Ig2 binds through hydrogen bonding.<ref name=":1" /> The unique properties on the concave surface are what determine which LAR-RPTP binds to it.<ref name=":1" /> If the proper LAR-RPTP is not bound to the LRR1 then synapse formation cannot occur, but bonding can still occur. Once they are bound properly, the complex is sufficient for synapse differentiation.<ref name=":1" /> Point mutations in the LRR1 region impaired differentiation as well but not binding.<ref name=":1" />
 
== Clinical significance ==
 
=== Tourette syndrome ===
The SLITRK1 gene "is not a major risk gene for the majority of individuals" with [[Tourette syndrome]] (TS), according to a 2009 review,<ref name=Rourke>{{cite journal |journal= J Psychosom Res |date= 2009  |volume= 67 |issue= 6 |pages= 533–45 |doi= 10.1016/j.jpsychores.2009.06.006 |title= The genetics of Tourette syndrome: a review|vauthors= O'Rourke JA, Scharf JM, Yu D, Pauls DL |pmc= 2778609}}</ref> although its study can help contribute to our understanding of TS.<ref>{{cite journal | vauthors = Grados MA, Walkup JT | title = A new gene for Tourette's syndrome: a window into causal mechanisms? | journal = Trends in Genetics | volume = 22 | issue = 6 | pages = 291–3 | date = June 2006 | pmid = 16678301 | doi = 10.1016/j.tig.2006.04.003 }}</ref><ref name=":2">{{cite journal | vauthors = Abelson JF, Kwan KY, O'Roak BJ, Baek DY, Stillman AA, Morgan TM, Mathews CA, Pauls DL, Rasin MR, Gunel M, Davis NR, Ercan-Sencicek AG, Guez DH, Spertus JA, Leckman JF, Dure LS, Kurlan R, Singer HS, Gilbert DL, Farhi A, Louvi A, Lifton RP, Sestan N, State MW | title = Sequence variants in SLITRK1 are associated with Tourette's syndrome | journal = Science | volume = 310 | issue = 5746 | pages = 317–20 | date = October 2005 | pmid = 16224024 | doi = 10.1126/science.1116502 }}</ref> Rare variants in SLITRK1 may lead to TS, and mutations in non-coding regions of SLITRK1 may also play a part, but further research needs to be done before any conclusions can be drawn.<ref name=":3" /><ref name=":4" />
 
In 2005, medical researchers observed a ''de novo'' translocation on 13q in a patient with TS which broke the patient's chromosome near the SLITRK1 genome.  In screening of additional patients, the authors observed a [[frameshift mutation]] in SLITRK1 in a patient with TS and the same rare non-coding variant (called var321 and varCDfs) in two patients with TS.<ref name=":2" />  These variants were not found in several thousand controls supporting an association of the variants with TS.<ref name=":2" />
 
A subsequent examination of the region of the SLITRK1 gene found the mutation in none of 82 patients with Tourette syndrome.  The authors concluded that tests to detect variant(s) in the gene probably would have little diagnostic utility.<ref>{{cite journal | vauthors = Deng H, Le WD, Xie WJ, Jankovic J | title = Examination of the SLITRK1 gene in Caucasian patients with Tourette syndrome | journal = Acta Neurologica Scandinavica | volume = 114 | issue = 6 | pages = 400–2 | date = December 2006 | pmid = 17083340 | doi = 10.1111/j.1600-0404.2006.00706.x }}</ref> An experiment in the effects of a microdeletion in chromosome 13q31.1 was done in a fetus, the mother had passed the microdeletion to the child and both did not have tourettes or any other OCD symptoms, showing that it may not be a direct cause of tourettes.<ref>{{cite journal | vauthors = Jia Y, Zhao H, Shi D, Peng W, Xie L, Wang W, Jiang F, Zhang H, Wang X | title = Genetic effects of a 13q31.1 microdeletion detected by noninvasive prenatal testing (NIPT) | journal = International Journal of Clinical and Experimental Pathology | volume = 7 | issue = 10 | pages = 7003–11 | date = 2014 | pmid = 25400788 | pmc = 4230093 }}</ref> Further attempts to replicate the study were done in multiple studies. In a Japanese study, [[next-gen sequencing]] was used to screen 92 TS patients and 361 healthy controls, none of TS patients were found to have mutations at either variant or any new mutations in the gene.<ref name=":4">{{cite journal | vauthors = Inai A, Tochigi M, Kuwabara H, Nishimura F, Kato K, Eriguchi Y, Shimada T, Furukawa M, Kawamura Y, Sasaki T, Kakiuchi C, Kasai K, Kano Y | title = Analysis of SLITRK1 in Japanese patients with Tourette syndrome using a next-generation sequencer | journal = Psychiatric Genetics | volume = 25 | issue = 6 | pages = 256–8 | date = December 2015 | pmid = 26317387 | doi = 10.1097/YPG.0000000000000104 }}</ref> In a European study it was found that the 2 original variations were not found in any of the 222 trios that were studied. However, tests were also done on [[Single-nucleotide polymorphism|SNPs]] in the groups and 3 were found to have variations. Two of the three variations were found to be associated with the formation of Tourette syndrome.<ref name=":3" /> In a different study of 381 Caucasians with some form of [[Obsessive–compulsive disorder|OCD]] with 356 non-OCD control patients, 3 genetic changes were found after genetic screening. Of the 3, 2 were identified only once each and the third was found in 4 OCD patients but also in a non-OCD patient.<ref name=":6" /> The non-OCD patient did have compulsive nail biting, but these studies show that a genetic link between SLITRK1 and patients with TS may exist <!--missing a word--> they are more complex in nature than previously understood.<ref name=":6" />
 
=== Trichotillomania ===
The SLITRK1 gene has also been implicated in a small percentage of cases of [[trichotillomania]], an impulse disorder in which individuals compulsively pull their own hair.<ref name="Chamberlain">{{cite journal | vauthors = Chamberlain SR, Menzies L, Sahakian BJ, Fineberg NA | title = Lifting the veil on trichotillomania | journal = The American Journal of Psychiatry | volume = 164 | issue = 4 | pages = 568–74 | date = April 2007 | pmid = 17403968 | doi = 10.1176/appi.ajp.164.4.568 | author3-link = Barbara Sahakian }}</ref><ref name=":7">{{cite journal | vauthors = Zuchner S, Cuccaro ML, Tran-Viet KN, Cope H, Krishnan RR, Pericak-Vance MA, Wright HH, Ashley-Koch A | title = SLITRK1 mutations in trichotillomania | journal = Molecular Psychiatry | volume = 11 | issue = 10 | pages = 887–9 | date = October 2006 | pmid = 17003809 | doi = 10.1038/sj.mp.4001865 }}</ref> In one of the previously mentioned studies the mother of the child who had a ''de novo'' translocation on 13q had trichotillomania; this would suggest that there could be a genetic link between SLITRK1 and trichotillomania as well.<ref name=":6" /><ref name=":7" />
 
A study was done in which 44 families with individuals who had trichotillomania had their SLITRK1 gene sequenced. Two new non-synonymous mutations were discovered about 9 base pairs apart from each other, in an area separate from the one where the Tourette mutations were found.<ref name=":5" /><ref name=":7" /> These results were compared to a control and none had the mutation, suggesting that these mutations, while rare, were associated with trichotillomania.<ref name=":7" />
 
== See also ==
* [[SLITRK2]]
* [[Protein tyrosine phosphatase]]
 
== References ==
{{reflist|2}}
 
[[Category:Etiology|Tourette syndrome]]
[[Category:Tourette syndrome]]

Latest revision as of 11:36, 9 January 2019

SLITRK1
Identifiers
SymbolSLITRK1
Alt. namesKIAA1910, LRRC12, UNQ233/PRO266
Entrez114798
HUGO20297
OMIM609678
PDB4RCW
UniProtQ96PX8
Other data
LocusChr. 13 q31.1

SLITRK1 ("SLIT and NTRK-like family, member 1") is a human gene that codes for a transmembrane and signalling protein that is part of the SLITRK gene family, which is responsible for synapse regulation and presynaptic differentiation in the brain.[1][2][3] Expression of the gene has been linked to early formation of excitatory synapses through binding with receptor tyrosine phosphatase PTP (LAR-RPTP).[1][2] Various studies over the years have linked mutations in the gene to conditions on the OCD spectrum, Tourette syndrome and trichotillomania, however the mutations in the genome itself vary greatly between individuals, with most mutations observed being hard to find in repeat studies.

Gene

The gene for SLITRK1 is located on chromosome 13q31.1. The gene is expressed only in the brain of humans. The mRNA can differ from alternative splicing, and contains domains for the extracellular matrix as well as for the LRRs.[4][5] Mice contain an ortholog of the gene called Slitrk1.[4]

Protein structure

SLITRK1 contains 2 horseshoe shaped leucine rich repeat domains (LRRs) in its extracellular domain which are vital to its function.[1] The LRRs have 6 modules each and are connected by a 70-90 amino acid loops.[2] LRR1 is a more conserved sequence and is present as a dimer while LRR2 is a monomer and has a more variable sequence.[2] The conserved sequence of LRR1 contains critical binding pockets and specific charged residues that are important for it to carry out its function of binding to LAR-RPTPs on the N-terminus.[1][2] Both LRR sequences are randomly positioned on the protein and contain variable linker regions.[2] The protein also contains a short intracellular domain, but lacks a tyrosine phosphorylation motif which is present in other SLITRK genes.[6]

Function

SLITKR1 is highly expressed in the central nervous system.[1] It plays a critical part in regulating synapse formation between hippocampal neurons and in differentiation of synapses, helping in neuronal outgrowth.[1][2][6][7] It is expressed during embryonic stages and postnatally but expression decreases over time and is localized to the postsynaptic membrane.[1][2]

Overexpression of SLITKR1 promotes postsynaptic differentiation for excitatory and inhibitory synapses, but because of the localization only excitatory synapses are affected.[1] Inhibition of SLITKR1 only reduces differentiation of excitatory synapses because of this.[1]

Interaction with LAR-RPTP

Since they lack tyrosine phosphorylation motifs, SLITKR1 binds to LAR-RPTP through its LRR1 region in order to differentiate synapses.[1][2] The LRR2 domain's function is not clearly understood yet but it is hypothesised that it is for dimerization to the cell surface.[1]

LAR-RPTP binds to the LRR1 region through its PTPδ Ig region, with 3 separate binding sites in a 1:1 binding ratio.[2] Ig1 binds through electrostatic and hydrophobic interactions, Ig2 binds through ionic and hydrogen bonds, and Ig2 binds through hydrogen bonding.[2] The unique properties on the concave surface are what determine which LAR-RPTP binds to it.[2] If the proper LAR-RPTP is not bound to the LRR1 then synapse formation cannot occur, but bonding can still occur. Once they are bound properly, the complex is sufficient for synapse differentiation.[2] Point mutations in the LRR1 region impaired differentiation as well but not binding.[2]

Clinical significance

Tourette syndrome

The SLITRK1 gene "is not a major risk gene for the majority of individuals" with Tourette syndrome (TS), according to a 2009 review,[8] although its study can help contribute to our understanding of TS.[9][10] Rare variants in SLITRK1 may lead to TS, and mutations in non-coding regions of SLITRK1 may also play a part, but further research needs to be done before any conclusions can be drawn.[6][11]

In 2005, medical researchers observed a de novo translocation on 13q in a patient with TS which broke the patient's chromosome near the SLITRK1 genome. In screening of additional patients, the authors observed a frameshift mutation in SLITRK1 in a patient with TS and the same rare non-coding variant (called var321 and varCDfs) in two patients with TS.[10] These variants were not found in several thousand controls supporting an association of the variants with TS.[10]

A subsequent examination of the region of the SLITRK1 gene found the mutation in none of 82 patients with Tourette syndrome. The authors concluded that tests to detect variant(s) in the gene probably would have little diagnostic utility.[12] An experiment in the effects of a microdeletion in chromosome 13q31.1 was done in a fetus, the mother had passed the microdeletion to the child and both did not have tourettes or any other OCD symptoms, showing that it may not be a direct cause of tourettes.[13] Further attempts to replicate the study were done in multiple studies. In a Japanese study, next-gen sequencing was used to screen 92 TS patients and 361 healthy controls, none of TS patients were found to have mutations at either variant or any new mutations in the gene.[11] In a European study it was found that the 2 original variations were not found in any of the 222 trios that were studied. However, tests were also done on SNPs in the groups and 3 were found to have variations. Two of the three variations were found to be associated with the formation of Tourette syndrome.[6] In a different study of 381 Caucasians with some form of OCD with 356 non-OCD control patients, 3 genetic changes were found after genetic screening. Of the 3, 2 were identified only once each and the third was found in 4 OCD patients but also in a non-OCD patient.[7] The non-OCD patient did have compulsive nail biting, but these studies show that a genetic link between SLITRK1 and patients with TS may exist they are more complex in nature than previously understood.[7]

Trichotillomania

The SLITRK1 gene has also been implicated in a small percentage of cases of trichotillomania, an impulse disorder in which individuals compulsively pull their own hair.[14][5] In one of the previously mentioned studies the mother of the child who had a de novo translocation on 13q had trichotillomania; this would suggest that there could be a genetic link between SLITRK1 and trichotillomania as well.[7][5]

A study was done in which 44 families with individuals who had trichotillomania had their SLITRK1 gene sequenced. Two new non-synonymous mutations were discovered about 9 base pairs apart from each other, in an area separate from the one where the Tourette mutations were found.[3][5] These results were compared to a control and none had the mutation, suggesting that these mutations, while rare, were associated with trichotillomania.[5]

See also

References

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 Beaubien F, Raja R, Kennedy TE, Fournier AE, Cloutier JF (June 2016). "Slitrk1 is localized to excitatory synapses and promotes their development". Scientific Reports. 6: 27343. doi:10.1038/srep27343. PMC 4895136. PMID 27273464.
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 Um JW, Kim KH, Park BS, Choi Y, Kim D, Kim CY, Kim SJ, Kim M, Ko JS, Lee SG, Choii G, Nam J, Heo WD, Kim E, Lee JO, Ko J, Kim HM (November 2014). "Structural basis for LAR-RPTP/Slitrk complex-mediated synaptic adhesion". Nature Communications. 5: 5423. doi:10.1038/ncomms6423. PMID 25394468.
  3. 3.0 3.1 Chattopadhyay K, Chatterjee K (August 2012). "The genetic factors influencing the development of trichotillomania". Journal of Genetics. 91 (2): 259–62. PMID 22942103.
  4. 4.0 4.1 "SLITRK1 SLIT and NTRK like family member 1 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-11-30.
  5. 5.0 5.1 5.2 5.3 5.4 Zuchner S, Cuccaro ML, Tran-Viet KN, Cope H, Krishnan RR, Pericak-Vance MA, Wright HH, Ashley-Koch A (October 2006). "SLITRK1 mutations in trichotillomania". Molecular Psychiatry. 11 (10): 887–9. doi:10.1038/sj.mp.4001865. PMID 17003809.
  6. 6.0 6.1 6.2 6.3 Karagiannidis I, Rizzo R, Tarnok Z, Wolanczyk T, Hebebrand J, Nöthen MM, Lehmkuhl G, Farkas L, Nagy P, Barta C, Szymanska U, Panteloglou G, Miranda DM, Feng Y, Sandor P, Barr C, Paschou P (July 2012). "Replication of association between a SLITRK1 haplotype and Tourette Syndrome in a large sample of families". Molecular Psychiatry. 17 (7): 665–8. doi:10.1038/mp.2011.151. PMID 22083730.
  7. 7.0 7.1 7.2 7.3 Ozomaro U, Cai G, Kajiwara Y, Yoon S, Makarov V, Delorme R, Betancur C, Ruhrmann S, Falkai P, Grabe HJ, Maier W, Wagner M, Lennertz L, Moessner R, Murphy DL, Buxbaum JD, Züchner S, Grice DE (2013). "Characterization of SLITRK1 variation in obsessive-compulsive disorder". PLOS One. 8 (8): e70376. doi:10.1371/journal.pone.0070376. PMC 3749144. PMID 23990902.
  8. O'Rourke JA, Scharf JM, Yu D, Pauls DL (2009). "The genetics of Tourette syndrome: a review". J Psychosom Res. 67 (6): 533–45. doi:10.1016/j.jpsychores.2009.06.006. PMC 2778609.
  9. Grados MA, Walkup JT (June 2006). "A new gene for Tourette's syndrome: a window into causal mechanisms?". Trends in Genetics. 22 (6): 291–3. doi:10.1016/j.tig.2006.04.003. PMID 16678301.
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