GNPDA1: Difference between revisions

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Latest revision as of 08:53, 31 August 2017

Glucosamine-6-phosphate isomerase 1 is an enzyme that in humans is encoded by the GNPDA1 gene.^[1]^[2]^[3]

References

↑ Shevchenko V, Hogben M, Ekong R, Parrington J, Lai FA (Oct 1998). "The human glucosamine-6-phosphate deaminase gene: cDNA cloning and expression, genomic organization and chromosomal localization". Gene. 216 (1): 31–8. doi:10.1016/S0378-1119(98)00335-7. PMID 9714720.
↑ Wolosker H, Kline D, Bian Y, Blackshaw S, Cameron AM, Fralich TJ, Schnaar RL, Snyder SH (Feb 1998). "Molecularly cloned mammalian glucosamine-6-phosphate deaminase localizes to transporting epithelium and lacks oscillin activity". FASEB J. 12 (1): 91–9. PMID 9438414.
↑ "Entrez Gene: GNPDA1 glucosamine-6-phosphate deaminase 1".

Weidanz JA, Campbell P, DeLucas LJ, et al. (1995). "Glucosamine 6-phosphate deaminase in normal human erythrocytes". Br. J. Haematol. 91 (1): 72–9. doi:10.1111/j.1365-2141.1995.tb05247.x. PMID 7577655.
Nomura N, Nagase T, Miyajima N, et al. (1995). "Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1". DNA Res. 1 (5): 223–9. doi:10.1093/dnares/1.5.223. PMID 7584044.
Oliva G, Fontes MR, Garratt RC, et al. (1996). "Structure and catalytic mechanism of glucosamine 6-phosphate deaminase from Escherichia coli at 2.1 A resolution". Structure. 3 (12): 1323–32. doi:10.1016/S0969-2126(01)00270-2. PMID 8747459.
Nakamura Y, Miura K, Fujino Y, et al. (2001). "Evolution, structure, and expression of GNPI/Oscillin orthologous genes". Genomics. 68 (2): 179–86. doi:10.1006/geno.2000.6287. PMID 10964516.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Zhang J, Zhang W, Zou D, et al. (2003). "Cloning and functional characterization of GNPI2, a novel human homolog of glucosamine-6-phosphate isomerase/oscillin". J. Cell. Biochem. 88 (5): 932–40. doi:10.1002/jcb.10444. PMID 12616532.
Arreola R, Valderrama B, Morante ML, Horjales E (2003). "Two mammalian glucosamine-6-phosphate deaminases: a structural and genetic study". FEBS Lett. 551 (1–3): 63–70. doi:10.1016/S0014-5793(03)00896-2. PMID 12965206.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Schmutz J, Martin J, Terry A, et al. (2004). "The DNA sequence and comparative analysis of human chromosome 5". Nature. 431 (7006): 268–74. doi:10.1038/nature02919. PMID 15372022.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.

External links

GNPDA1 human gene location in the UCSC Genome Browser.
GNPDA1 human gene details in the UCSC Genome Browser.

This article on a gene on human chromosome 5 is a stub. You can help Wikipedia by expanding it.

[pmid9714720-1] Shevchenko V, Hogben M, Ekong R, Parrington J, Lai FA (Oct 1998). "The human glucosamine-6-phosphate deaminase gene: cDNA cloning and expression, genomic organization and chromosomal localization". Gene. 216 (1): 31–8. doi:10.1016/S0378-1119(98)00335-7. PMID 9714720.

[pmid9438414-2] Wolosker H, Kline D, Bian Y, Blackshaw S, Cameron AM, Fralich TJ, Schnaar RL, Snyder SH (Feb 1998). "Molecularly cloned mammalian glucosamine-6-phosphate deaminase localizes to transporting epithelium and lacks oscillin activity". FASEB J. 12 (1): 91–9. PMID 9438414.

[entrez-3] "Entrez Gene: GNPDA1 glucosamine-6-phosphate deaminase 1".

[1]

[2]

[3]

@@ Line 1: / Line 1: @@
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+{{Infobox_gene}}
-{{PBB_Controls
+'''Glucosamine-6-phosphate isomerase 1''' is an [[enzyme]] that in humans is encoded by the ''GNPDA1'' [[gene]].<ref name="pmid9714720">{{cite journal |vauthors=Shevchenko V, Hogben M, Ekong R, Parrington J, Lai FA | title = The human glucosamine-6-phosphate deaminase gene: cDNA cloning and expression, genomic organization and chromosomal localization | journal = Gene | volume = 216 | issue = 1 | pages = 31–8 |date=Oct 1998 | pmid = 9714720 | pmc =  | doi =10.1016/S0378-1119(98)00335-7  }}</ref><ref name="pmid9438414">{{cite journal |vauthors=Wolosker H, Kline D, Bian Y, Blackshaw S, Cameron AM, Fralich TJ, Schnaar RL, Snyder SH | title = Molecularly cloned mammalian glucosamine-6-phosphate deaminase localizes to transporting epithelium and lacks oscillin activity | journal = FASEB J | volume = 12 | issue = 1 | pages = 91–9 |date=Feb 1998 | pmid = 9438414 | pmc =  | doi =  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: GNPDA1 glucosamine-6-phosphate deaminase 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10007| accessdate = }}</ref>
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- | image = PBB_Protein_GNPDA1_image.jpg
- | image_source = [[Protein_Data_Bank|PDB]] rendering based on 1ne7.
- | PDB = {{PDB2|1ne7}}
- | Name = Glucosamine-6-phosphate deaminase 1
- | HGNCid = 4417
- | Symbol = GNPDA1
- | AltSymbols =; GPI; GNPI; GNPDA; HLN; KIAA0060
- | OMIM = 601798
- | ECnumber =
- | Homologene = 38054
- | MGIid = 1347054
-  | GeneAtlas_image1 = PBB_GE_GNPDA1_202382_s_at_tn.png
-  | Function = {{GNF_GO|id=GO:0004342 |text = glucosamine-6-phosphate deaminase activity}} {{GNF_GO|id=GO:0016787 |text = hydrolase activity}}
- | Component =
- | Process = {{GNF_GO|id=GO:0005975 |text = carbohydrate metabolic process}} {{GNF_GO|id=GO:0006043 |text = glucosamine catabolic process}} {{GNF_GO|id=GO:0006044 |text = N-acetylglucosamine metabolic process}} {{GNF_GO|id=GO:0006091 |text = generation of precursor metabolites and energy}} {{GNF_GO|id=GO:0007338 |text = single fertilization}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 10007
-    | Hs_Ensembl = ENSG00000113552
-    | Hs_RefseqProtein = NP_005462
-    | Hs_RefseqmRNA = NM_005471
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 5
-    | Hs_GenLoc_start = 141360422
-    | Hs_GenLoc_end = 141372776
-    | Hs_Uniprot = P46926
-    | Mm_EntrezGene = 26384
-    | Mm_Ensembl =
-    | Mm_RefseqmRNA = NM_011937
-    | Mm_RefseqProtein = NP_036067
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr =
-    | Mm_GenLoc_start =
-    | Mm_GenLoc_end =
-    | Mm_Uniprot =
-  }}
-}}
-'''Glucosamine-6-phosphate deaminase 1''', also known as '''GNPDA1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: GNPDA1 glucosamine-6-phosphate deaminase 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10007| accessdate = }}</ref>
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 {{PBB_Summary
@@ Line 53: / Line 6: @@
 | summary_text =
 }}
+==References==
+{{reflist}}
-==References==
-{{reflist|2}}
 ==Further reading==
 {{refbegin | 2}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Weidanz JA, Campbell P, DeLucas LJ, ''et al.'' |title=Glucosamine 6-phosphate deaminase in normal human erythrocytes. |journal=Br. J. Haematol. |volume=91 |issue= 1 |pages= 72-9 |year= 1995 |pmid= 7577655 |doi=  }}
+*{{cite journal  |vauthors=Weidanz JA, Campbell P, DeLucas LJ |title=Glucosamine 6-phosphate deaminase in normal human erythrocytes. |journal=Br. J. Haematol. |volume=91 |issue= 1 |pages= 72–9 |year= 1995 |pmid= 7577655 |doi=10.1111/j.1365-2141.1995.tb05247.x  |display-authors=etal}}
-*{{cite journal  | author=Nomura N, Nagase T, Miyajima N, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1. |journal=DNA Res. |volume=1 |issue= 5 |pages= 223-9 |year= 1995 |pmid= 7584044 |doi=  }}
+*{{cite journal  |vauthors=Nomura N, Nagase T, Miyajima N |title=Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1. |journal=DNA Res. |volume=1 |issue= 5 |pages= 223–9 |year= 1995 |pmid= 7584044 |doi=10.1093/dnares/1.5.223  |display-authors=etal}}
-*{{cite journal  | author=Oliva G, Fontes MR, Garratt RC, ''et al.'' |title=Structure and catalytic mechanism of glucosamine 6-phosphate deaminase from Escherichia coli at 2.1 A resolution. |journal=Structure |volume=3 |issue= 12 |pages= 1323-32 |year= 1996 |pmid= 8747459 |doi=  }}
+*{{cite journal  |vauthors=Oliva G, Fontes MR, Garratt RC |title=Structure and catalytic mechanism of glucosamine 6-phosphate deaminase from Escherichia coli at 2.1 A resolution. |journal=Structure |volume=3 |issue= 12 |pages= 1323–32 |year= 1996 |pmid= 8747459 |doi=10.1016/S0969-2126(01)00270-2  |display-authors=etal}}
-*{{cite journal  | author=Wolosker H, Kline D, Bian Y, ''et al.'' |title=Molecularly cloned mammalian glucosamine-6-phosphate deaminase localizes to transporting epithelium and lacks oscillin activity. |journal=FASEB J. |volume=12 |issue= 1 |pages= 91-9 |year= 1998 |pmid= 9438414 |doi=  }}
+*{{cite journal  |vauthors=Nakamura Y, Miura K, Fujino Y |title=Evolution, structure, and expression of GNPI/Oscillin orthologous genes. |journal=Genomics |volume=68 |issue= 2 |pages= 179–86 |year= 2001 |pmid= 10964516 |doi= 10.1006/geno.2000.6287 |display-authors=etal}}
-*{{cite journal  | author=Shevchenko V, Hogben M, Ekong R, ''et al.'' |title=The human glucosamine-6-phosphate deaminase gene: cDNA cloning and expression, genomic organization and chromosomal localization. |journal=Gene |volume=216 |issue= 1 |pages= 31-8 |year= 1998 |pmid= 9714720 |doi=  }}
+*{{cite journal  |vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
-*{{cite journal  | author=Nakamura Y, Miura K, Fujino Y, ''et al.'' |title=Evolution, structure, and expression of GNPI/Oscillin orthologous genes. |journal=Genomics |volume=68 |issue= 2 |pages= 179-86 |year= 2001 |pmid= 10964516 |doi= 10.1006/geno.2000.6287 }}
+*{{cite journal  |vauthors=Zhang J, Zhang W, Zou D |title=Cloning and functional characterization of GNPI2, a novel human homolog of glucosamine-6-phosphate isomerase/oscillin. |journal=J. Cell. Biochem. |volume=88 |issue= 5 |pages= 932–40 |year= 2003 |pmid= 12616532 |doi= 10.1002/jcb.10444 |display-authors=etal}}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  |vauthors=Arreola R, Valderrama B, Morante ML, Horjales E |title=Two mammalian glucosamine-6-phosphate deaminases: a structural and genetic study. |journal=FEBS Lett. |volume=551 |issue= 1-3 |pages= 63–70 |year= 2003 |pmid= 12965206 |doi=10.1016/S0014-5793(03)00896-2  }}
-*{{cite journal  | author=Zhang J, Zhang W, Zou D, ''et al.'' |title=Cloning and functional characterization of GNPI2, a novel human homolog of glucosamine-6-phosphate isomerase/oscillin. |journal=J. Cell. Biochem. |volume=88 |issue= 5 |pages= 932-40 |year= 2003 |pmid= 12616532 |doi= 10.1002/jcb.10444 }}
+*{{cite journal  |vauthors=Ota T, Suzuki Y, Nishikawa T |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 |display-authors=etal}}
-*{{cite journal  | author=Arreola R, Valderrama B, Morante ML, Horjales E |title=Two mammalian glucosamine-6-phosphate deaminases: a structural and genetic study. |journal=FEBS Lett. |volume=551 |issue= 1-3 |pages= 63-70 |year= 2003 |pmid= 12965206 |doi=  }}
+*{{cite journal  |vauthors=Schmutz J, Martin J, Terry A |title=The DNA sequence and comparative analysis of human chromosome 5. |journal=Nature |volume=431 |issue= 7006 |pages= 268–74 |year= 2004 |pmid= 15372022 |doi= 10.1038/nature02919 |display-authors=etal}}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal  |vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 |display-authors=etal}}
-*{{cite journal  | author=Schmutz J, Martin J, Terry A, ''et al.'' |title=The DNA sequence and comparative analysis of human chromosome 5. |journal=Nature |volume=431 |issue= 7006 |pages= 268-74 |year= 2004 |pmid= 15372022 |doi= 10.1038/nature02919 }}
+*{{cite journal  |vauthors=Rual JF, Venkatesan K, Hao T |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |display-authors=etal}}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
-*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
 }}
 {{refend}}
-{{protein-stub}}
+==External links==
-{{WikiDoc Sources}}
+* {{UCSC genome browser|GNPDA1}}
+* {{UCSC gene details|GNPDA1}}
+{{PDB Gallery|geneid=10007}}
+<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{PBB_Controls
+| update_page = yes
+| require_manual_inspection = no
+| update_protein_box = yes
+| update_summary = yes
+| update_citations = yes
+}}
+{{gene-5-stub}}

GNPDA1: Difference between revisions

Latest revision as of 08:53, 31 August 2017

References

Further reading

External links

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