EIF2C2: Difference between revisions

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{{Infobox_gene}}
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'''Protein argonaute-2''' is a [[protein]] that in humans is encoded by the ''EIF2C2'' [[gene]].<ref name="pmid10534406">{{cite journal | vauthors = Koesters R, Adams V, Betts D, Moos R, Schmid M, Siermann A, Hassam S, Weitz S, Lichter P, Heitz PU, von Knebel Doeberitz M, Briner J | title = Human eukaryotic initiation factor EIF2C1 gene: cDNA sequence, genomic organization, localization to chromosomal bands 1p34-p35, and expression | journal = Genomics | volume = 61 | issue = 2 | pages = 210–8 |date=Dec 1999 | pmid = 10534406 | pmc =  | doi = 10.1006/geno.1999.5951 }}</ref><ref name="pmid12906857">{{cite journal | vauthors = Sasaki T, Shiohama A, Minoshima S, Shimizu N | title = Identification of eight members of the Argonaute family in the human genome small star, filled | journal = Genomics | volume = 82 | issue = 3 | pages = 323–30 |date=Aug 2003 | pmid = 12906857 | pmc =  | doi =10.1016/S0888-7543(03)00129-0 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: EIF2C2 eukaryotic translation initiation factor 2C, 2| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27161| accessdate = }}</ref>
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{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = Eukaryotic translation initiation factor 2C, 2
| HGNCid = 3263
| Symbol = EIF2C2
| AltSymbols =; AGO2; MGC3183; Q10
| OMIM = 606229
| ECnumber =
| Homologene = 81825
| MGIid = 2446632
  | Function = {{GNF_GO|id=GO:0003743 |text = translation initiation factor activity}} {{GNF_GO|id=GO:0005515 |text = protein binding}}
| Component = {{GNF_GO|id=GO:0005575 |text = cellular_component}}
| Process = {{GNF_GO|id=GO:0006412 |text = translation}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 27161
    | Hs_Ensembl = ENSG00000123908
    | Hs_RefseqProtein = NP_036286
    | Hs_RefseqmRNA = NM_012154
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 8
    | Hs_GenLoc_start = 141610447
    | Hs_GenLoc_end = 141714827
    | Hs_Uniprot = Q9UKV8
    | Mm_EntrezGene = 239528
    | Mm_Ensembl = ENSMUSG00000036698
    | Mm_RefseqmRNA = NM_153178
    | Mm_RefseqProtein = NP_694818
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 15
    | Mm_GenLoc_start = 72934164
    | Mm_GenLoc_end = 72973825
    | Mm_Uniprot = A1A563
  }}
}}
'''Eukaryotic translation initiation factor 2C, 2''', also known as '''EIF2C2''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: EIF2C2 eukaryotic translation initiation factor 2C, 2| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27161| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, and contains a PAZ domain and a PIWI domain. It may interact with dicer1 and play a role in short-interfering-RNA-mediated gene silencing.<ref name="entrez">{{cite web | title = Entrez Gene: EIF2C2 eukaryotic translation initiation factor 2C, 2| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27161| accessdate = }}</ref>
| summary_text = This gene encodes a member of the [[Argonaute]] family of proteins which play a role in RNA interference. The encoded protein is highly basic, and contains a [[PAZ domain]] and a [[PIWI domain]]. It may interact with [[DICER1|Dicer1]] and play a role in short-interfering-RNA-mediated gene silencing.<ref name="entrez">{{cite web | title = Entrez Gene: EIF2C2 eukaryotic translation initiation factor 2C, 2| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27161| accessdate = }}</ref>
}}
}}
==Interactions==
EIF2C2 has been shown to [[Protein-protein interaction|interact]] with
* [[DDX20]],<ref name="pmid14970384">{{cite journal | vauthors = Nelson PT, Hatzigeorgiou AG, Mourelatos Z | title = miRNP:mRNA association in polyribosomes in a human neuronal cell line | journal = RNA | volume = 10 | issue = 3 | pages = 387–94 |date=March 2004 | pmid = 14970384 | pmc = 1370934 | doi = 10.1261/rna.5181104| url = | issn = }}</ref><ref name="pmid11914277">{{cite journal | vauthors = Mourelatos Z, Dostie J, Paushkin S, Sharma A, Charroux B, Abel L, Rappsilber J, Mann M, Dreyfuss G | title = miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs | journal = Genes Dev. | volume = 16 | issue = 6 | pages = 720–8 |date=March 2002 | pmid = 11914277 | pmc = 155365 | doi = 10.1101/gad.974702 | url = | issn = }}</ref>
* [[DICER1]],<ref name=pmid11914277/><ref name="pmid12526743">{{cite journal | vauthors = Doi N, Zenno S, Ueda R, Ohki-Hamazaki H, Ui-Tei K, Saigo K | title = Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors | journal = Curr. Biol. | volume = 13 | issue = 1 | pages = 41–6 |date=January 2003 | pmid = 12526743 | doi = 10.1016/S0960-9822(02)01394-5| url = | issn = }}</ref>
* [[FMR1|FMRP]], [[FXR1|FXR1P]], [[FXR2|FXR2P]],<ref name="pmid14703574">{{cite journal | vauthors = Jin P, Zarnescu DC, Ceman S, Nakamoto M, Mowrey J, Jongens TA, Nelson DL, Moses K, Warren ST | title = Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway | journal = Nat. Neurosci. | volume = 7 | issue = 2 | pages = 113–7 |date=February 2004 | pmid = 14703574 | doi = 10.1038/nn1174 | url = | issn = }}</ref> and
* [[TNRC6B]].<ref name="pmid17891150">{{cite journal | vauthors = Till S, Lejeune E, Thermann R, Bortfeld M, Hothorn M, Enderle D, Heinrich C, Hentze MW, Ladurner AG | title = A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain | journal = Nat. Struct. Mol. Biol. | volume = 14 | issue = 10 | pages = 897–903 |date=October 2007 | pmid = 17891150 | doi = 10.1038/nsmb1302 | url = | issn = }}</ref>


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Carmell MA, Xuan Z, Zhang MQ, Hannon GJ |title=The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. |journal=Genes Dev. |volume=16 |issue= 21 |pages= 2733-42 |year= 2002 |pmid= 12414724 |doi= 10.1101/gad.1026102 }}
*{{cite journal  | vauthors=Carmell MA, Xuan Z, Zhang MQ, Hannon GJ |title=The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. |journal=Genes Dev. |volume=16 |issue= 21 |pages= 2733–42 |year= 2002 |pmid= 12414724 |doi= 10.1101/gad.1026102 }}
*{{cite journal  | author=Koesters R, Adams V, Betts D, ''et al.'' |title=Human eukaryotic initiation factor EIF2C1 gene: cDNA sequence, genomic organization, localization to chromosomal bands 1p34-p35, and expression. |journal=Genomics |volume=61 |issue= 2 |pages= 210-8 |year= 1999 |pmid= 10534406 |doi= 10.1006/geno.1999.5951 }}
*{{cite journal  | vauthors=Mourelatos Z, Dostie J, Paushkin S |title=miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. |journal=Genes Dev. |volume=16 |issue= 6 |pages= 720–8 |year= 2002 |pmid= 11914277 |doi= 10.1101/gad.974702 | pmc=155365 |display-authors=etal}}
*{{cite journal  | author=Mourelatos Z, Dostie J, Paushkin S, ''et al.'' |title=miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. |journal=Genes Dev. |volume=16 |issue= 6 |pages= 720-8 |year= 2002 |pmid= 11914277 |doi= 10.1101/gad.974702 }}
*{{cite journal  | vauthors=Martinez J, Patkaniowska A, Urlaub H |title=Single-stranded antisense siRNAs guide target RNA cleavage in RNAi. |journal=Cell |volume=110 |issue= 5 |pages= 563–74 |year= 2003 |pmid= 12230974 |doi=10.1016/S0092-8674(02)00908-X |display-authors=etal}}
*{{cite journal  | author=Martinez J, Patkaniowska A, Urlaub H, ''et al.'' |title=Single-stranded antisense siRNAs guide target RNA cleavage in RNAi. |journal=Cell |volume=110 |issue= 5 |pages= 563-74 |year= 2003 |pmid= 12230974 |doi=  }}
*{{cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |display-authors=etal}}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | vauthors=Doi N, Zenno S, Ueda R |title=Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors. |journal=Curr. Biol. |volume=13 |issue= 1 |pages= 41–6 |year= 2003 |pmid= 12526743 |doi=10.1016/S0960-9822(02)01394-5 |display-authors=etal}}
*{{cite journal  | author=Doi N, Zenno S, Ueda R, ''et al.'' |title=Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors. |journal=Curr. Biol. |volume=13 |issue= 1 |pages= 41-6 |year= 2003 |pmid= 12526743 |doi= }}
*{{cite journal  | vauthors=Tahbaz N, Kolb FA, Zhang H |title=Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer. |journal=EMBO Rep. |volume=5 |issue= 2 |pages= 189–94 |year= 2004 |pmid= 14749716 |doi= 10.1038/sj.embor.7400070 | pmc=1298981 |display-authors=etal}}
*{{cite journal | author=Sasaki T, Shiohama A, Minoshima S, Shimizu N |title=Identification of eight members of the Argonaute family in the human genome small star, filled. |journal=Genomics |volume=82 |issue= 3 |pages= 323-30 |year= 2004 |pmid= 12906857 |doi=  }}
*{{cite journal  | vauthors=Nelson PT, Hatzigeorgiou AG, Mourelatos Z |title=miRNP:mRNA association in polyribosomes in a human neuronal cell line. |journal=RNA |volume=10 |issue= 3 |pages= 387–94 |year= 2004 |pmid= 14970384 |doi=10.1261/rna.5181104  | pmc=1370934 }}
*{{cite journal  | author=Tahbaz N, Kolb FA, Zhang H, ''et al.'' |title=Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer. |journal=EMBO Rep. |volume=5 |issue= 2 |pages= 189-94 |year= 2004 |pmid= 14749716 |doi= 10.1038/sj.embor.7400070 }}
*{{cite journal  | vauthors=Liu J, Carmell MA, Rivas FV |title=Argonaute2 is the catalytic engine of mammalian RNAi. |journal=Science |volume=305 |issue= 5689 |pages= 1437–41 |year= 2004 |pmid= 15284456 |doi= 10.1126/science.1102513 |display-authors=etal}}
*{{cite journal  | author=Nelson PT, Hatzigeorgiou AG, Mourelatos Z |title=miRNP:mRNA association in polyribosomes in a human neuronal cell line. |journal=RNA |volume=10 |issue= 3 |pages= 387-94 |year= 2004 |pmid= 14970384 |doi=  }}
*{{cite journal  | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}}
*{{cite journal  | author=Liu J, Carmell MA, Rivas FV, ''et al.'' |title=Argonaute2 is the catalytic engine of mammalian RNAi. |journal=Science |volume=305 |issue= 5689 |pages= 1437-41 |year= 2004 |pmid= 15284456 |doi= 10.1126/science.1102513 }}
*{{cite journal  | vauthors=Rivas FV, Tolia NH, Song JJ |title=Purified Argonaute2 and an siRNA form recombinant human RISC. |journal=Nat. Struct. Mol. Biol. |volume=12 |issue= 4 |pages= 340–9 |year= 2005 |pmid= 15800637 |doi= 10.1038/nsmb918 |display-authors=etal}}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | vauthors=Sen GL, Blau HM |title=Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies. |journal=Nat. Cell Biol. |volume=7 |issue= 6 |pages= 633–6 |year= 2005 |pmid= 15908945 |doi= 10.1038/ncb1265 }}
*{{cite journal  | author=Rivas FV, Tolia NH, Song JJ, ''et al.'' |title=Purified Argonaute2 and an siRNA form recombinant human RISC. |journal=Nat. Struct. Mol. Biol. |volume=12 |issue= 4 |pages= 340-9 |year= 2005 |pmid= 15800637 |doi= 10.1038/nsmb918 }}
*{{cite journal  | vauthors=Liu J, Valencia-Sanchez MA, Hannon GJ, Parker R |title=MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies. |journal=Nat. Cell Biol. |volume=7 |issue= 7 |pages= 719–23 |year= 2005 |pmid= 15937477 |doi= 10.1038/ncb1274 | pmc=1855297 }}
*{{cite journal  | author=Sen GL, Blau HM |title=Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies. |journal=Nat. Cell Biol. |volume=7 |issue= 6 |pages= 633-6 |year= 2005 |pmid= 15908945 |doi= 10.1038/ncb1265 }}
*{{cite journal  | vauthors=Rual JF, Venkatesan K, Hao T |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |display-authors=etal}}
*{{cite journal  | author=Liu J, Valencia-Sanchez MA, Hannon GJ, Parker R |title=MicroRNA-dependent localization of targeted mRNAs to mammalian P-bodies. |journal=Nat. Cell Biol. |volume=7 |issue= 7 |pages= 719-23 |year= 2005 |pmid= 15937477 |doi= 10.1038/ncb1274 }}
*{{cite journal  | vauthors=Kraynack BA, Baker BF |title=Small interfering RNAs containing full 2'-O-methylribonucleotide-modified sense strands display Argonaute2/eIF2C2-dependent activity. |journal=RNA |volume=12 |issue= 1 |pages= 163–76 |year= 2006 |pmid= 16301602 |doi= 10.1261/rna.2150806 | pmc=1370895 }}
*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{cite journal  | vauthors=Maniataki E, Mourelatos Z |title=A human, ATP-independent, RISC assembly machine fueled by pre-miRNA. |journal=Genes Dev. |volume=19 |issue= 24 |pages= 2979–90 |year= 2006 |pmid= 16357216 |doi= 10.1101/gad.1384005 | pmc=1315402 }}
*{{cite journal  | author=Kraynack BA, Baker BF |title=Small interfering RNAs containing full 2'-O-methylribonucleotide-modified sense strands display Argonaute2/eIF2C2-dependent activity. |journal=RNA |volume=12 |issue= 1 |pages= 163-76 |year= 2006 |pmid= 16301602 |doi= 10.1261/rna.2150806 }}
*{{cite journal  | vauthors=Shi H, Tschudi C, Ullu E |title=Functional replacement of Trypanosoma brucei Argonaute by the human slicer Argonaute2. |journal=RNA |volume=12 |issue= 6 |pages= 943–7 |year= 2006 |pmid= 16611939 |doi= 10.1261/rna.20806 | pmc=1464859 }}
*{{cite journal  | author=Maniataki E, Mourelatos Z |title=A human, ATP-independent, RISC assembly machine fueled by pre-miRNA. |journal=Genes Dev. |volume=19 |issue= 24 |pages= 2979-90 |year= 2006 |pmid= 16357216 |doi= 10.1101/gad.1384005 }}
*{{cite journal  | vauthors=Wichroski MJ, Robb GB, Rana TM |title=Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies. |journal=PLoS Pathog. |volume=2 |issue= 5 |pages= e41 |year= 2006 |pmid= 16699599 |doi= 10.1371/journal.ppat.0020041 | pmc=1458959 }}
*{{cite journal  | author=Shi H, Tschudi C, Ullu E |title=Functional replacement of Trypanosoma brucei Argonaute by the human slicer Argonaute2. |journal=RNA |volume=12 |issue= 6 |pages= 943-7 |year= 2006 |pmid= 16611939 |doi= 10.1261/rna.20806 }}
*{{cite journal  | author=Wichroski MJ, Robb GB, Rana TM |title=Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies. |journal=PLoS Pathog. |volume=2 |issue= 5 |pages= e41 |year= 2006 |pmid= 16699599 |doi= 10.1371/journal.ppat.0020041 }}
}}
}}
{{refend}}
{{refend}}


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[[Category:RNA interference]]
 
 
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Latest revision as of 00:24, 31 August 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

n/a

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RefSeq (protein)

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Protein argonaute-2 is a protein that in humans is encoded by the EIF2C2 gene.[1][2][3]

This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, and contains a PAZ domain and a PIWI domain. It may interact with Dicer1 and play a role in short-interfering-RNA-mediated gene silencing.[3]

Interactions

EIF2C2 has been shown to interact with

References

  1. ↑ Koesters R, Adams V, Betts D, Moos R, Schmid M, Siermann A, Hassam S, Weitz S, Lichter P, Heitz PU, von Knebel Doeberitz M, Briner J (Dec 1999). "Human eukaryotic initiation factor EIF2C1 gene: cDNA sequence, genomic organization, localization to chromosomal bands 1p34-p35, and expression". Genomics. 61 (2): 210–8. doi:10.1006/geno.1999.5951. PMID 10534406.
  2. ↑ Sasaki T, Shiohama A, Minoshima S, Shimizu N (Aug 2003). "Identification of eight members of the Argonaute family in the human genome small star, filled". Genomics. 82 (3): 323–30. doi:10.1016/S0888-7543(03)00129-0. PMID 12906857.
  3. ↑ 3.0 3.1 "Entrez Gene: EIF2C2 eukaryotic translation initiation factor 2C, 2".
  4. ↑ Nelson PT, Hatzigeorgiou AG, Mourelatos Z (March 2004). "miRNP:mRNA association in polyribosomes in a human neuronal cell line". RNA. 10 (3): 387–94. doi:10.1261/rna.5181104. PMC 1370934. PMID 14970384.
  5. ↑ 5.0 5.1 Mourelatos Z, Dostie J, Paushkin S, Sharma A, Charroux B, Abel L, Rappsilber J, Mann M, Dreyfuss G (March 2002). "miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs". Genes Dev. 16 (6): 720–8. doi:10.1101/gad.974702. PMC 155365. PMID 11914277.
  6. ↑ Doi N, Zenno S, Ueda R, Ohki-Hamazaki H, Ui-Tei K, Saigo K (January 2003). "Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors". Curr. Biol. 13 (1): 41–6. doi:10.1016/S0960-9822(02)01394-5. PMID 12526743.
  7. ↑ Jin P, Zarnescu DC, Ceman S, Nakamoto M, Mowrey J, Jongens TA, Nelson DL, Moses K, Warren ST (February 2004). "Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway". Nat. Neurosci. 7 (2): 113–7. doi:10.1038/nn1174. PMID 14703574.
  8. ↑ Till S, Lejeune E, Thermann R, Bortfeld M, Hothorn M, Enderle D, Heinrich C, Hentze MW, Ladurner AG (October 2007). "A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain". Nat. Struct. Mol. Biol. 14 (10): 897–903. doi:10.1038/nsmb1302. PMID 17891150.

Further reading


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