TIAL1: Difference between revisions

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{{Infobox_gene}}
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'''Nucleolysin TIAR''' is a [[protein]] that in humans is encoded by the ''TIAL1'' [[gene]].<ref name="pmid1326761">{{cite journal | vauthors = Kawakami A, Tian Q, Duan X, Streuli M, Schlossman SF, Anderson P | title = Identification and functional characterization of a TIA-1-related nucleolysin | journal = Proc Natl Acad Sci U S A | volume = 89 | issue = 18 | pages = 8681–5 |date=Oct 1992 | pmid = 1326761 | pmc = 49984 | doi =10.1073/pnas.89.18.8681 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=7073| accessdate = }}</ref>
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{{GNF_Protein_box
| image = PBB_Protein_TIAL1_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1x4g.
| PDB = {{PDB2|1x4g}}, {{PDB2|2cqi}}, {{PDB2|2dgo}}, {{PDB2|2dh7}}
| Name = TIA1 cytotoxic granule-associated RNA binding protein-like 1
| HGNCid = 11804
| Symbol = TIAL1
| AltSymbols =; MGC33401; TCBP; TIAR
| OMIM = 603413
| ECnumber =
| Homologene = 87796
| MGIid = 107913
| GeneAtlas_image1 = PBB_GE_TIAL1_202405_at_tn.png
| GeneAtlas_image2 = PBB_GE_TIAL1_202406_s_at_tn.png
  | Function = {{GNF_GO|id=GO:0000166 |text = nucleotide binding}} {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0003702 |text = RNA polymerase II transcription factor activity}} {{GNF_GO|id=GO:0003723 |text = RNA binding}}
| Component = {{GNF_GO|id=GO:0005575 |text = cellular_component}} {{GNF_GO|id=GO:0005764 |text = lysosome}}
| Process = {{GNF_GO|id=GO:0006357 |text = regulation of transcription from RNA polymerase II promoter}} {{GNF_GO|id=GO:0006915 |text = apoptosis}} {{GNF_GO|id=GO:0006917 |text = induction of apoptosis}} {{GNF_GO|id=GO:0006952 |text = defense response}} {{GNF_GO|id=GO:0008150 |text = biological_process}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 7073
    | Hs_Ensembl = ENSG00000151923
    | Hs_RefseqProtein = NP_001029097
    | Hs_RefseqmRNA = NM_001033925
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 10
    | Hs_GenLoc_start = 121322970
    | Hs_GenLoc_end = 121346531
    | Hs_Uniprot = Q01085
    | Mm_EntrezGene = 21843
    | Mm_Ensembl = ENSMUSG00000030846
    | Mm_RefseqmRNA = NM_009383
    | Mm_RefseqProtein = NP_033409
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 7
    | Mm_GenLoc_start = 128233450
    | Mm_GenLoc_end = 128252437
    | Mm_Uniprot = Q545C1
  }}
}}
'''TIA1 cytotoxic granule-associated RNA binding protein-like 1''', also known as '''TIAL1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=7073| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = The protein encoded by this gene is a member of a family of RNA-binding proteins, has three RNA recognition motifs (RRMs), and binds adenine and uridine-rich elements in mRNA and pre-mRNAs of a wide range of genes. It regulates various activities including translational control, splicing and apoptosis. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. The different isoforms have been show to function differently with respect to post-transcriptional silencing.<ref name="entrez">{{cite web | title = Entrez Gene: TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=7073| accessdate = }}</ref>
| summary_text = The protein encoded by this gene is a member of a family of RNA-binding proteins, has three RNA recognition motifs (RRMs), and binds adenine and uridine-rich elements in mRNA and pre-mRNAs of a wide range of genes. It regulates various activities including translational control, splicing and apoptosis. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. The different isoforms have been show to function differently with respect to post-transcriptional silencing.<ref name="entrez">{{cite web | title = Entrez Gene: TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=7073| accessdate = }}</ref>
}}
}}


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal | author=Kawakami A, Tian Q, Duan X, ''et al.'' |title=Identification and functional characterization of a TIA-1-related nucleolysin. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=89 |issue= 18 |pages= 8681-5 |year= 1992 |pmid= 1326761 |doi= }}
*{{cite journal   |vauthors=Taupin JL, Tian Q, Kedersha N, etal |title=The RNA-binding protein TIAR is translocated from the nucleus to the cytoplasm during Fas-mediated apoptotic cell death. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=92 |issue= 5 |pages= 1629–33 |year= 1995 |pmid= 7533298 |doi=10.1073/pnas.92.5.1629  | pmc=42573  }}
*{{cite journal  | author=Taupin JL, Tian Q, Kedersha N, ''et al.'' |title=The RNA-binding protein TIAR is translocated from the nucleus to the cytoplasm during Fas-mediated apoptotic cell death. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=92 |issue= 5 |pages= 1629-33 |year= 1995 |pmid= 7533298 |doi=  }}
*{{cite journal  | vauthors=Dember LM, Kim ND, Liu KQ, Anderson P |title=Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities. |journal=J. Biol. Chem. |volume=271 |issue= 5 |pages= 2783–8 |year= 1996 |pmid= 8576255 |doi=10.1074/jbc.271.5.2783 }}
*{{cite journal | author=Dember LM, Kim ND, Liu KQ, Anderson P |title=Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities. |journal=J. Biol. Chem. |volume=271 |issue= 5 |pages= 2783-8 |year= 1996 |pmid= 8576255 |doi= }}
*{{cite journal   |vauthors=Doi T, Minami T, Itoh M, etal |title=An alternative form of nucleolysin binds to a T-cluster DNA in the silencer element of platelet factor 4 gene. |journal=Biochem. Biophys. Res. Commun. |volume=235 |issue= 3 |pages= 625–30 |year= 1997 |pmid= 9207209 |doi= 10.1006/bbrc.1997.6817 }}
*{{cite journal | author=Doi T, Minami T, Itoh M, ''et al.'' |title=An alternative form of nucleolysin binds to a T-cluster DNA in the silencer element of platelet factor 4 gene. |journal=Biochem. Biophys. Res. Commun. |volume=235 |issue= 3 |pages= 625-30 |year= 1997 |pmid= 9207209 |doi= 10.1006/bbrc.1997.6817 }}
*{{cite journal   |vauthors=Jin K, Li W, Nagayama T, etal |title=Expression of the RNA-binding protein TIAR is increased in neurons after ischemic cerebral injury. |journal=J. Neurosci. Res. |volume=59 |issue= 6 |pages= 767–74 |year= 2000 |pmid= 10700014 |doi=10.1002/(SICI)1097-4547(20000315)59:6<767::AID-JNR9>3.0.CO;2-K  }}
*{{cite journal | author=Jin K, Li W, Nagayama T, ''et al.'' |title=Expression of the RNA-binding protein TIAR is increased in neurons after ischemic cerebral injury. |journal=J. Neurosci. Res. |volume=59 |issue= 6 |pages= 767-74 |year= 2000 |pmid= 10700014 |doi= }}
*{{cite journal   |vauthors=Le Guiner C, Lejeune F, Galiana D, etal |title=TIA-1 and TIAR activate splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on their own pre-mRNAs. |journal=J. Biol. Chem. |volume=276 |issue= 44 |pages= 40638–46 |year= 2001 |pmid= 11514562 |doi= 10.1074/jbc.M105642200 }}
*{{cite journal | author=Le Guiner C, Lejeune F, Galiana D, ''et al.'' |title=TIA-1 and TIAR activate splicing of alternative exons with weak 5' splice sites followed by a U-rich stretch on their own pre-mRNAs. |journal=J. Biol. Chem. |volume=276 |issue= 44 |pages= 40638-46 |year= 2001 |pmid= 11514562 |doi= 10.1074/jbc.M105642200 }}
*{{cite journal   |vauthors=Iseni F, Garcin D, Nishio M, etal |title=Sendai virus trailer RNA binds TIAR, a cellular protein involved in virus-induced apoptosis. |journal=EMBO J. |volume=21 |issue= 19 |pages= 5141–50 |year= 2002 |pmid= 12356730 |doi=10.1093/emboj/cdf513  | pmc=129035  }}
*{{cite journal | author=Iseni F, Garcin D, Nishio M, ''et al.'' |title=Sendai virus trailer RNA binds TIAR, a cellular protein involved in virus-induced apoptosis. |journal=EMBO J. |volume=21 |issue= 19 |pages= 5141-50 |year= 2002 |pmid= 12356730 |doi= }}
*{{cite journal   |vauthors=Li W, Li Y, Kedersha N, etal |title=Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication. |journal=J. Virol. |volume=76 |issue= 23 |pages= 11989–2000 |year= 2002 |pmid= 12414941 |doi=10.1128/JVI.76.23.11989-12000.2002  | pmc=136884  }}
*{{cite journal  | author=Li W, Li Y, Kedersha N, ''et al.'' |title=Cell proteins TIA-1 and TIAR interact with the 3' stem-loop of the West Nile virus complementary minus-strand RNA and facilitate virus replication. |journal=J. Virol. |volume=76 |issue= 23 |pages= 11989-2000 |year= 2002 |pmid= 12414941 |doi= }}
*{{cite journal  | vauthors=Yu Q, Cok SJ, Zeng C, Morrison AR |title=Translational repression of human matrix metalloproteinases-13 by an alternatively spliced form of T-cell-restricted intracellular antigen-related protein (TIAR). |journal=J. Biol. Chem. |volume=278 |issue= 3 |pages= 1579–84 |year= 2003 |pmid= 12426321 |doi= 10.1074/jbc.M203526200 }}
*{{cite journal | author=Yu Q, Cok SJ, Zeng C, Morrison AR |title=Translational repression of human matrix metalloproteinases-13 by an alternatively spliced form of T-cell-restricted intracellular antigen-related protein (TIAR). |journal=J. Biol. Chem. |volume=278 |issue= 3 |pages= 1579-84 |year= 2003 |pmid= 12426321 |doi= 10.1074/jbc.M203526200 }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | vauthors=Le Guiner C, Gesnel MC, Breathnach R |title=TIA-1 or TIAR is required for DT40 cell viability. |journal=J. Biol. Chem. |volume=278 |issue= 12 |pages= 10465–76 |year= 2003 |pmid= 12533540 |doi= 10.1074/jbc.M212378200 }}
*{{cite journal  | author=Le Guiner C, Gesnel MC, Breathnach R |title=TIA-1 or TIAR is required for DT40 cell viability. |journal=J. Biol. Chem. |volume=278 |issue= 12 |pages= 10465-76 |year= 2003 |pmid= 12533540 |doi= 10.1074/jbc.M212378200 }}
*{{cite journal  | vauthors=Cok SJ, Acton SJ, Morrison AR |title=The proximal region of the 3'-untranslated region of cyclooxygenase-2 is recognized by a multimeric protein complex containing HuR, TIA-1, TIAR, and the heterogeneous nuclear ribonucleoprotein U. |journal=J. Biol. Chem. |volume=278 |issue= 38 |pages= 36157–62 |year= 2003 |pmid= 12855701 |doi= 10.1074/jbc.M302547200 }}
*{{cite journal | author=Cok SJ, Acton SJ, Morrison AR |title=The proximal region of the 3'-untranslated region of cyclooxygenase-2 is recognized by a multimeric protein complex containing HuR, TIA-1, TIAR, and the heterogeneous nuclear ribonucleoprotein U. |journal=J. Biol. Chem. |volume=278 |issue= 38 |pages= 36157-62 |year= 2003 |pmid= 12855701 |doi= 10.1074/jbc.M302547200 }}
*{{cite journal   |vauthors=Zhu H, Hasman RA, Young KM, etal |title=U1 snRNP-dependent function of TIAR in the regulation of alternative RNA processing of the human calcitonin/CGRP pre-mRNA. |journal=Mol. Cell. Biol. |volume=23 |issue= 17 |pages= 5959–71 |year= 2003 |pmid= 12917321 |doi=10.1128/MCB.23.17.5959-5971.2003  | pmc=180986  }}
*{{cite journal | author=Zhu H, Hasman RA, Young KM, ''et al.'' |title=U1 snRNP-dependent function of TIAR in the regulation of alternative RNA processing of the human calcitonin/CGRP pre-mRNA. |journal=Mol. Cell. Biol. |volume=23 |issue= 17 |pages= 5959-71 |year= 2003 |pmid= 12917321 |doi= }}
*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal   |vauthors=Shukla S, Dirksen WP, Joyce KM, etal |title=TIA proteins are necessary but not sufficient for the tissue-specific splicing of the myosin phosphatase targeting subunit 1. |journal=J. Biol. Chem. |volume=279 |issue= 14 |pages= 13668–76 |year= 2004 |pmid= 14736875 |doi= 10.1074/jbc.M314138200 }}
*{{cite journal  | author=Shukla S, Dirksen WP, Joyce KM, ''et al.'' |title=TIA proteins are necessary but not sufficient for the tissue-specific splicing of the myosin phosphatase targeting subunit 1. |journal=J. Biol. Chem. |volume=279 |issue= 14 |pages= 13668-76 |year= 2004 |pmid= 14736875 |doi= 10.1074/jbc.M314138200 }}
*{{cite journal  | vauthors=Esclatine A, Taddeo B, Roizman B |title=Herpes simplex virus 1 induces cytoplasmic accumulation of TIA-1/TIAR and both synthesis and cytoplasmic accumulation of tristetraprolin, two cellular proteins that bind and destabilize AU-rich RNAs. |journal=J. Virol. |volume=78 |issue= 16 |pages= 8582–92 |year= 2004 |pmid= 15280467 |doi= 10.1128/JVI.78.16.8582-8592.2004  | pmc=479066 }}
*{{cite journal  | author=Esclatine A, Taddeo B, Roizman B |title=Herpes simplex virus 1 induces cytoplasmic accumulation of TIA-1/TIAR and both synthesis and cytoplasmic accumulation of tristetraprolin, two cellular proteins that bind and destabilize AU-rich RNAs. |journal=J. Virol. |volume=78 |issue= 16 |pages= 8582-92 |year= 2004 |pmid= 15280467 |doi= 10.1128/JVI.78.16.8582-8592.2004 }}
*{{cite journal  | vauthors=Hua Y, Zhou J |title=Survival motor neuron protein facilitates assembly of stress granules. |journal=FEBS Lett. |volume=572 |issue= 1-3 |pages= 69–74 |year= 2004 |pmid= 15304326 |doi= 10.1016/j.febslet.2004.07.010 }}
*{{cite journal | author=Hua Y, Zhou J |title=Survival motor neuron protein facilitates assembly of stress granules. |journal=FEBS Lett. |volume=572 |issue= 1-3 |pages= 69-74 |year= 2004 |pmid= 15304326 |doi= 10.1016/j.febslet.2004.07.010 }}
*{{cite journal   |vauthors=Suswam EA, Nabors LB, Huang Y, etal |title=IL-1beta induces stabilization of IL-8 mRNA in malignant breast cancer cells via the 3' untranslated region: Involvement of divergent RNA-binding factors HuR, KSRP and TIAR. |journal=Int. J. Cancer |volume=113 |issue= 6 |pages= 911–9 |year= 2005 |pmid= 15514971 |doi= 10.1002/ijc.20675 }}
*{{cite journal | author=Suswam EA, Nabors LB, Huang Y, ''et al.'' |title=IL-1beta induces stabilization of IL-8 mRNA in malignant breast cancer cells via the 3' untranslated region: Involvement of divergent RNA-binding factors HuR, KSRP and TIAR. |journal=Int. J. Cancer |volume=113 |issue= 6 |pages= 911-9 |year= 2005 |pmid= 15514971 |doi= 10.1002/ijc.20675 }}
*{{cite journal   |vauthors=Rush J, Moritz A, Lee KA, etal |title=Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. |journal=Nat. Biotechnol. |volume=23 |issue= 1 |pages= 94–101 |year= 2005 |pmid= 15592455 |doi= 10.1038/nbt1046 }}
*{{cite journal  | author=Rush J, Moritz A, Lee KA, ''et al.'' |title=Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. |journal=Nat. Biotechnol. |volume=23 |issue= 1 |pages= 94-101 |year= 2005 |pmid= 15592455 |doi= 10.1038/nbt1046 }}
*{{cite journal  | vauthors=Suswam EA, Li YY, Mahtani H, King PH |title=Novel DNA-binding properties of the RNA-binding protein TIAR. |journal=Nucleic Acids Res. |volume=33 |issue= 14 |pages= 4507–18 |year= 2005 |pmid= 16091628 |doi= 10.1093/nar/gki763 | pmc=1184220 }}
*{{cite journal | author=Suswam EA, Li YY, Mahtani H, King PH |title=Novel DNA-binding properties of the RNA-binding protein TIAR. |journal=Nucleic Acids Res. |volume=33 |issue= 14 |pages= 4507-18 |year= 2005 |pmid= 16091628 |doi= 10.1093/nar/gki763 }}
}}
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{{PDB Gallery|geneid=7073}}
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Revision as of 11:52, 15 September 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Nucleolysin TIAR is a protein that in humans is encoded by the TIAL1 gene.[1][2]

The protein encoded by this gene is a member of a family of RNA-binding proteins, has three RNA recognition motifs (RRMs), and binds adenine and uridine-rich elements in mRNA and pre-mRNAs of a wide range of genes. It regulates various activities including translational control, splicing and apoptosis. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. The different isoforms have been show to function differently with respect to post-transcriptional silencing.[2]

References

  1. Kawakami A, Tian Q, Duan X, Streuli M, Schlossman SF, Anderson P (Oct 1992). "Identification and functional characterization of a TIA-1-related nucleolysin". Proc Natl Acad Sci U S A. 89 (18): 8681–5. doi:10.1073/pnas.89.18.8681. PMC 49984. PMID 1326761.
  2. 2.0 2.1 "Entrez Gene: TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1".

Further reading