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{{Infobox_gene}}
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'''Zinc finger protein RFP''' is a [[protein]] that in humans is encoded by the ''TRIM27'' [[gene]].<ref name="pmid8114113">{{cite journal |vauthors=Vernet C, Boretto J, Mattei MG, Takahashi M, Jack LJ, Mather IH, Rouquier S, Pontarotti P | title = Evolutionary study of multigenic families mapping close to the human MHC class I region | journal = J Mol Evol | volume = 37 | issue = 6 | pages = 600–12 |date=Mar 1994 | pmid = 8114113 | pmc =  | doi =  10.1007/bf00182746| bibcode =1993JMolE..37..600V }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: TRIM27 tripartite motif-containing 27| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5987| accessdate = }}</ref>
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{{GNF_Protein_box
| image =
| image_source =
| PDB =  
| Name = Tripartite motif-containing 27
| HGNCid = 9975
| Symbol = TRIM27
| AltSymbols =; RFP; RNF76
| OMIM = 602165
| ECnumber =
  | Homologene = 4748
  | MGIid = 97904
| GeneAtlas_image1 = PBB_GE_TRIM27_212118_at_tn.png
| GeneAtlas_image2 = PBB_GE_TRIM27_210541_s_at_tn.png
| GeneAtlas_image3 = PBB_GE_TRIM27_212116_at_tn.png
| Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0004714 |text = transmembrane receptor protein tyrosine kinase activity}} {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}}
| Component = {{GNF_GO|id=GO:0005622 |text = intracellular}} {{GNF_GO|id=GO:0005624 |text = membrane fraction}} {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005737 |text = cytoplasm}} {{GNF_GO|id=GO:0005887 |text = integral to plasma membrane}}
| Process = {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0007283 |text = spermatogenesis}} {{GNF_GO|id=GO:0008283 |text = cell proliferation}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 5987
    | Hs_Ensembl = ENSG00000112448
    | Hs_RefseqProtein = NP_112212
    | Hs_RefseqmRNA = NM_030950
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = c6_COX
    | Hs_GenLoc_start = 29019921
    | Hs_GenLoc_end = 29039845
    | Hs_Uniprot = P14373
    | Mm_EntrezGene = 19720
    | Mm_Ensembl = ENSMUSG00000021326
    | Mm_RefseqmRNA = NM_009054
    | Mm_RefseqProtein = NP_033080
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 13
    | Mm_GenLoc_start = 21187678
    | Mm_GenLoc_end = 21202188
    | Mm_Uniprot = Q5U3K6
  }}
}}
'''Tripartite motif-containing 27''', also known as '''TRIM27''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: TRIM27 tripartite motif-containing 27| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5987| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This protein localizes to the nuclear matrix. It interacts with the enhancer of polycomb protein and represses gene transcription. It is also thought to be involved in the differentiation of male germ cells. Fusion of the N-terminus of this protein with the truncated C-terminus of the RET gene product has been shown to result in production of the ret transforming protein.<ref name="entrez">{{cite web | title = Entrez Gene: TRIM27 tripartite motif-containing 27| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5987| accessdate = }}</ref>
| summary_text = This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This protein localizes to the nuclear matrix. It interacts with the enhancer of polycomb protein and represses gene transcription. It is also thought to be involved in the differentiation of male germ cells. Fusion of the N-terminus of this protein with the truncated C-terminus of the RET gene product has been shown to result in production of the ret transforming protein.<ref name="entrez"/>
}}
}}
==Interactions==
TRIM27 has been shown to [[Protein-protein interaction|interact]] with [[PRAM1]]<ref name=pmid9570750>{{cite journal |last=Cao |first=T |authorlink= |author2=Duprez E |author3=Borden K L |author4=Freemont P S |author5=Etkin L D  |date=May 1998 |title=Ret finger protein is a normal component of PML nuclear bodies and interacts directly with PML |journal=J. Cell Sci. |volume=111 |issue= 10|pages=1319–29 |publisher= |location = ENGLAND| issn = 0021-9533| pmid = 9570750 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> and [[EIF3S6]].<ref name=pmid10504338>{{cite journal |last=Morris-Desbois |first=C |authorlink= |author2=Bochard V |author3=Reynaud C |author4=Jalinot P  |date=Oct 1999 |title=Interaction between the Ret finger protein and the Int-6 gene product and co-localisation into nuclear bodies |journal=J. Cell Sci. |volume=112 |issue= 19|pages=3331–42 |publisher= |location = ENGLAND| issn = 0021-9533| pmid = 10504338 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref>


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Borden KL |title=RING fingers and B-boxes: zinc-binding protein-protein interaction domains. |journal=Biochem. Cell Biol. |volume=76 |issue= 2-3 |pages= 351-8 |year= 1999 |pmid= 9923704 |doi=  }}
*{{cite journal  | author=Borden KL |title=RING fingers and B-boxes: zinc-binding protein-protein interaction domains. |journal=Biochem. Cell Biol. |volume=76 |issue= 2–3 |pages= 351–8 |year= 1999 |pmid= 9923704 |doi=10.1139/bcb-76-2-3-351 }}
*{{cite journal | author=Isomura T, Tamiya-Koizumi K, Suzuki M, ''et al.'' |title=RFP is a DNA binding protein associated with the nuclear matrix. |journal=Nucleic Acids Res. |volume=20 |issue= 20 |pages= 5305-10 |year= 1992 |pmid= 1437549 |doi=  }}
*{{cite journal   |vauthors=Isomura T, Tamiya-Koizumi K, Suzuki M, etal |title=RFP is a DNA binding protein associated with the nuclear matrix |journal=Nucleic Acids Res. |volume=20 |issue= 20 |pages= 5305–10 |year= 1992 |pmid= 1437549 |doi=10.1093/nar/20.20.5305  | pmc=334335 }}
*{{cite journal | author=Ishizaka Y, Ochiai M, Tahira T, ''et al.'' |title=Activation of the ret-II oncogene without a sequence encoding a transmembrane domain and transforming activity of two ret-II oncogene products differing in carboxy-termini due to alternative splicing. |journal=Oncogene |volume=4 |issue= 6 |pages= 789-94 |year= 1989 |pmid= 2734021 |doi=  }}
*{{cite journal   |vauthors=Ishizaka Y, Ochiai M, Tahira T, etal |title=Activation of the ret-II oncogene without a sequence encoding a transmembrane domain and transforming activity of two ret-II oncogene products differing in carboxy-termini due to alternative splicing |journal=Oncogene |volume=4 |issue= 6 |pages= 789–94 |year= 1989 |pmid= 2734021 |doi=  }}
*{{cite journal  | author=Takahashi M, Cooper GM |title=ret transforming gene encodes a fusion protein homologous to tyrosine kinases. |journal=Mol. Cell. Biol. |volume=7 |issue= 4 |pages= 1378-85 |year= 1987 |pmid= 3037315 |doi=  }}
*{{cite journal  |vauthors=Takahashi M, Cooper GM |title=ret transforming gene encodes a fusion protein homologous to tyrosine kinases |journal=Mol. Cell. Biol. |volume=7 |issue= 4 |pages= 1378–85 |year= 1987 |pmid= 3037315 |doi= | pmc=365224 }}
*{{cite journal | author=Takahashi M, Buma Y, Iwamoto T, ''et al.'' |title=Cloning and expression of the ret proto-oncogene encoding a tyrosine kinase with two potential transmembrane domains. |journal=Oncogene |volume=3 |issue= 5 |pages= 571-8 |year= 1990 |pmid= 3078962 |doi=  }}
*{{cite journal   |vauthors=Takahashi M, Buma Y, Iwamoto T, etal |title=Cloning and expression of the ret proto-oncogene encoding a tyrosine kinase with two potential transmembrane domains |journal=Oncogene |volume=3 |issue= 5 |pages= 571–8 |year= 1990 |pmid= 3078962 |doi=  }}
*{{cite journal  | author=Takahashi M, Inaguma Y, Hiai H, Hirose F |title=Developmentally regulated expression of a human "finger"-containing gene encoded by the 5' half of the ret transforming gene. |journal=Mol. Cell. Biol. |volume=8 |issue= 4 |pages= 1853-6 |year= 1988 |pmid= 3380101 |doi=  }}
*{{cite journal  |vauthors=Takahashi M, Inaguma Y, Hiai H, Hirose F |title=Developmentally regulated expression of a human "finger"-containing gene encoded by the 5' half of the ret transforming gene |journal=Mol. Cell. Biol. |volume=8 |issue= 4 |pages= 1853–6 |year= 1988 |pmid= 3380101 |doi=  | pmc=363354 }}
*{{cite journal  | author=Vernet C, Boretto J, Mattéi MG, ''et al.'' |title=Evolutionary study of multigenic families mapping close to the human MHC class I region. |journal=J. Mol. Evol. |volume=37 |issue= 6 |pages= 600-12 |year= 1994 |pmid= 8114113 |doi=  }}
*{{cite journal  |vauthors=Cao T, Borden KL, Freemont PS, Etkin LD |title=Involvement of the rfp tripartite motif in protein-protein interactions and subcellular distribution |journal=J. Cell Sci. |volume=110 |issue=  14|pages= 1563–71 |year= 1997 |pmid= 9247190 |doi=  }}
*{{cite journal  | author=Cao T, Borden KL, Freemont PS, Etkin LD |title=Involvement of the rfp tripartite motif in protein-protein interactions and subcellular distribution. |journal=J. Cell. Sci. |volume=110 ( Pt 14) |issue=  |pages= 1563-71 |year= 1997 |pmid= 9247190 |doi=  }}
*{{cite journal   |vauthors=Cao T, Duprez E, Borden KL, etal |title=Ret finger protein is a normal component of PML nuclear bodies and interacts directly with PML |journal=J. Cell Sci. |volume=111 |issue=  10|pages= 1319–29 |year= 1998 |pmid= 9570750 |doi=  }}
*{{cite journal | author=Cao T, Duprez E, Borden KL, ''et al.'' |title=Ret finger protein is a normal component of PML nuclear bodies and interacts directly with PML. |journal=J. Cell. Sci. |volume=111 ( Pt 10) |issue=  |pages= 1319-29 |year= 1998 |pmid= 9570750 |doi=  }}
*{{cite journal  |vauthors=Morris-Desbois C, Bochard V, Reynaud C, Jalinot P |title=Interaction between the Ret finger protein and the Int-6 gene product and co-localisation into nuclear bodies |journal=J. Cell Sci. |volume=112 |issue=  19|pages= 3331–42 |year= 1999 |pmid= 10504338 |doi=  }}
*{{cite journal  | author=Morris-Desbois C, Bochard V, Reynaud C, Jalinot P |title=Interaction between the Ret finger protein and the Int-6 gene product and co-localisation into nuclear bodies. |journal=J. Cell. Sci. |volume=112 ( Pt 19) |issue=  |pages= 3331-42 |year= 1999 |pmid= 10504338 |doi=  }}
*{{cite journal  |vauthors=Shimono Y, Murakami H, Hasegawa Y, Takahashi M |title=RET finger protein is a transcriptional repressor and interacts with enhancer of polycomb that has dual transcriptional functions |journal=J. Biol. Chem. |volume=275 |issue= 50 |pages= 39411–9 |year= 2001 |pmid= 10976108 |doi= 10.1074/jbc.M006585200 }}
*{{cite journal  | author=Shimono Y, Murakami H, Hasegawa Y, Takahashi M |title=RET finger protein is a transcriptional repressor and interacts with enhancer of polycomb that has dual transcriptional functions. |journal=J. Biol. Chem. |volume=275 |issue= 50 |pages= 39411-9 |year= 2001 |pmid= 10976108 |doi= 10.1074/jbc.M006585200 }}
*{{cite journal   |vauthors=Reymond A, Meroni G, Fantozzi A, etal |title=The tripartite motif family identifies cell compartments |journal=EMBO J. |volume=20 |issue= 9 |pages= 2140–51 |year= 2001 |pmid= 11331580 |doi= 10.1093/emboj/20.9.2140 | pmc=125245 }}
*{{cite journal | author=Reymond A, Meroni G, Fantozzi A, ''et al.'' |title=The tripartite motif family identifies cell compartments. |journal=EMBO J. |volume=20 |issue= 9 |pages= 2140-51 |year= 2001 |pmid= 11331580 |doi= 10.1093/emboj/20.9.2140 }}
*{{cite journal  |vauthors=Tezel G, Nagasaka T, Shimono Y, Takahashi M |title=Differential expression of RET finger protein in testicular germ cell tumors |journal=Pathol. Int. |volume=52 |issue= 10 |pages= 623–7 |year= 2003 |pmid= 12445133 |doi=10.1046/j.1440-1827.2002.01401.x }}
*{{cite journal  | author=Tezel G, Nagasaka T, Shimono Y, Takahashi M |title=Differential expression of RET finger protein in testicular germ cell tumors. |journal=Pathol. Int. |volume=52 |issue= 10 |pages= 623-7 |year= 2003 |pmid= 12445133 |doi=  }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |bibcode=2002PNAS...9916899M }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal   |vauthors=Saenko V, Rogounovitch T, Shimizu-Yoshida Y, etal |title=Novel tumorigenic rearrangement, Delta rfp/ret, in a papillary thyroid carcinoma from externally irradiated patient |journal=Mutat. Res. |volume=527 |issue= 1–2 |pages= 81–90 |year= 2003 |pmid= 12787916 |doi=  10.1016/S0027-5107(03)00056-3}}
*{{cite journal | author=Saenko V, Rogounovitch T, Shimizu-Yoshida Y, ''et al.'' |title=Novel tumorigenic rearrangement, Delta rfp/ret, in a papillary thyroid carcinoma from externally irradiated patient. |journal=Mutat. Res. |volume=527 |issue= 1-2 |pages= 81-90 |year= 2003 |pmid= 12787916 |doi=  }}
*{{cite journal  |vauthors=Dho SH, Kwon KS |title=The Ret finger protein induces apoptosis via its RING finger-B box-coiled-coil motif |journal=J. Biol. Chem. |volume=278 |issue= 34 |pages= 31902–8 |year= 2003 |pmid= 12807881 |doi= 10.1074/jbc.M304062200 }}
*{{cite journal  | author=Dho SH, Kwon KS |title=The Ret finger protein induces apoptosis via its RING finger-B box-coiled-coil motif. |journal=J. Biol. Chem. |volume=278 |issue= 34 |pages= 31902-8 |year= 2003 |pmid= 12807881 |doi= 10.1074/jbc.M304062200 }}
*{{cite journal   |vauthors=Shimono Y, Murakami H, Kawai K, etal |title=Mi-2 beta associates with BRG1 and RET finger protein at the distinct regions with transcriptional activating and repressing abilities |journal=J. Biol. Chem. |volume=278 |issue= 51 |pages= 51638–45 |year= 2004 |pmid= 14530259 |doi= 10.1074/jbc.M309198200 }}
*{{cite journal | author=Shimono Y, Murakami H, Kawai K, ''et al.'' |title=Mi-2 beta associates with BRG1 and RET finger protein at the distinct regions with transcriptional activating and repressing abilities. |journal=J. Biol. Chem. |volume=278 |issue= 51 |pages= 51638-45 |year= 2004 |pmid= 14530259 |doi= 10.1074/jbc.M309198200 }}
*{{cite journal   |vauthors=Mungall AJ, Palmer SA, Sims SK, etal |title=The DNA sequence and analysis of human chromosome 6 |journal=Nature |volume=425 |issue= 6960 |pages= 805–11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
}}
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Latest revision as of 19:16, 26 June 2018

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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RefSeq (mRNA)

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View/Edit Human

Zinc finger protein RFP is a protein that in humans is encoded by the TRIM27 gene.[1][2]

This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This protein localizes to the nuclear matrix. It interacts with the enhancer of polycomb protein and represses gene transcription. It is also thought to be involved in the differentiation of male germ cells. Fusion of the N-terminus of this protein with the truncated C-terminus of the RET gene product has been shown to result in production of the ret transforming protein.[2]

Interactions

TRIM27 has been shown to interact with PRAM1[3] and EIF3S6.[4]

References

  1. ↑ Vernet C, Boretto J, Mattei MG, Takahashi M, Jack LJ, Mather IH, Rouquier S, Pontarotti P (Mar 1994). "Evolutionary study of multigenic families mapping close to the human MHC class I region". J Mol Evol. 37 (6): 600–12. Bibcode:1993JMolE..37..600V. doi:10.1007/bf00182746. PMID 8114113.
  2. ↑ 2.0 2.1 "Entrez Gene: TRIM27 tripartite motif-containing 27".
  3. ↑ Cao, T; Duprez E; Borden K L; Freemont P S; Etkin L D (May 1998). "Ret finger protein is a normal component of PML nuclear bodies and interacts directly with PML". J. Cell Sci. ENGLAND. 111 (10): 1319–29. ISSN 0021-9533. PMID 9570750.
  4. ↑ Morris-Desbois, C; Bochard V; Reynaud C; Jalinot P (Oct 1999). "Interaction between the Ret finger protein and the Int-6 gene product and co-localisation into nuclear bodies". J. Cell Sci. ENGLAND. 112 (19): 3331–42. ISSN 0021-9533. PMID 10504338.

Further reading



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