Non-degenerate nucleotides per response element: Difference between revisions

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Line 43: Line 43:
| 2 || TC || 122 || - || 14 || Absent  
| 2 || TC || 122 || - || 14 || Absent  
|-
|-
| 2(16) || GA || 106 || 97.4 ± 15.5 || 16 || Absent  
| 2(16,16) || GA || 106 || 97.4 ± 15.5 || 16 || Absent  
|-
|-
| 3(1) || TAT || 20 || 20.0 ± 0.0 || 1 || Present  
| 3(1) || TAT || 20 || 20.0 ± 0.0 || 1 || Present  
Line 83: Line 83:
| 3(19) || ATG || 17 || - || 12 || Absent  
| 3(19) || ATG || 17 || - || 12 || Absent  
|-
|-
| 3(2) || CCA || 36 || - || 14 || Absent  
| 3(20) || CCA || 36 || - || 14 || Absent  
|-
|-
| 3 || AAT || 23 || - || 14 || Absent  
| 3(21) || AAT || 23 || - || 14 || Absent  
|-
|-
| 3 || ATC || 25 || - || 14 || Absent  
| 3(22) || ATC || 25 || - || 14 || Absent  
|-
|-
| 3 || TTA || 16 || - || 15 || Absent  
| 3(23) || TTA || 16 || - || 15 || Absent  
|-
|-
| 3 || CCC || 25 || - || 15 || Absent  
| 3(24) || CCC || 25 || - || 15 || Absent  
|-
|-
| 3 || CCT || 18 || - || 15 || Absent  
| 3(25) || CCT || 18 || - || 15 || Absent  
|-
|-
| 3 || TAC || 15 || - || 15 || Absent  
| 3(26) || TAC || 15 || - || 15 || Absent  
|-
|-
| 3 || TTT || 18 || - || 16 || Absent  
| 3(27) || TTT || 18 || - || 16 || Absent  
|-
|-
| 3 || TCG || 11 || - || 16 || Absent  
| 3(28) || TCG || 11 || - || 16 || Absent  
|-
|-
| 3 || GGA || 16 || - || 16 || Absent  
| 3(29) || GGA || 16 || - || 16 || Absent  
|-
|-
| 3 || GCG || 24 || - || 16 || Absent  
| 3(30) || GCG || 24 || - || 16 || Absent  
|-
|-
| 3 || CGT || 40 || - || 16 || Absent  
| 3(31) || CGT || 40 || - || 16 || Absent  
|-
|-
| 3 || CGG || 25 || - || 16 || Absent  
| 3(32) || CGG || 25 || - || 16 || Absent  
|-
|-
| 3 || GAA || 37 || - || 16 || Absent  
| 3(33) || GAA || 37 || - || 16 || Absent  
|-
|-
| 3 || TTC || 43 || - || 16 || Absent  
| 3(34) || TTC || 43 || - || 16 || Absent  
|-
|-
| 3 || GGG || 18 || - || 16 || Absent  
| 3(35) || GGG || 18 || - || 16 || Absent  
|-
|-
| 3 || TCC || 27 || - || 18 & 19 || Absent  
| 3(36) || TCC || 27 || - || 18 & 19 || Absent  
|-
|-
| 3 || CAC || 34 || - || 18 & 19 || Absent  
| 3(37) || CAC || 34 || - || 18 & 19 || Absent  
|-
|-
| 3 || TGA || 36 || - || 20 || Absent  
| 3(38) || TGA || 36 || - || 20 || Absent  
|-
|-
| 3 || TCA || 43 || - || 20 || Absent  
| 3(39) || TCA || 43 || - || 20 || Absent  
|-
|-
| 3 || GAC || 24 || - || 21 || Absent  
| 3(40) || GAC || 24 || - || 21 || Absent  
|-
|-
| 3 || ACA || 20 || - || 21 || Absent  
| 3(41) || ACA || 20 || - || 21 || Absent  
|-
|-
| 3 || CGA || 14 || - || 21 || Absent  
| 3(42) || CGA || 14 || - || 21 || Absent  
|-
|-
| 3 || GTG || 39 || - || 22 || Absent  
| 3(43) || GTG || 39 || - || 22 || Absent  
|-
|-
| 3 || GGT || 27 || - || 22 || Absent  
| 3(44) || GGT || 27 || - || 22 || Absent  
|-
|-
| 3(1092/45) || GAT || 24 || 24.21 ± 12.42 || 28 || Absent  
| 3(45) || GAT || 24,1092 || 24.21 ± 12.42 || 28 || Absent  
|-
| 3(46) || - || - || - || - || -
|-
| 3(47) || - || - || - || - || -
|-
| 3(48) || - || - || - || - || -
|-
| 3(49) || - || - || - || - || -
|-
| 3(50) || - || - || - || - || -
|-
| 3(51) || - || - || - || - || -
|-
| 3(52) || - || - || - || - || -
|-
| 3(53) || - || - || - || - || -
|-
| 3(54) || - || - || - || - || -
|-
| 3(55) || - || - || - || - || -
|-
| 3(56) || - || - || - || - || -
|-
| 3(57) || - || - || - || - || -
|-
| 3(58) || - || - || - || - || -
|-
| 3(59) || - || - || - || - || -
|-
| 3(60) || - || - || - || - || -
|-
| 3(61) || - || - || - || - || -
|-
| 3(62) || - || - || - || - || -
|-
| 3(63) || - || - || - || - || -
|-
| 3(64,64) || - || - || - || - || -
|-
|-
| 4(1) || AAAA || 6 || 6.0 ± 0.0 || 1 || Present  
| 4(1) || AAAA || 6 || 6.0 ± 0.0 || 1 || Present  
Line 280: Line 318:
|-
|-
| 4 || TCGA || 4 || - || 28 || Absent  
| 4 || TCGA || 4 || - || 28 || Absent  
|-
| 4 || GTAT || 3 || - || 32 || Absent
|-
| 4 || GACG || 8 || - || 32 || Absent
|-
| 4 || TGAC || 15 || - || 32 || Absent
|-
|-
| 4 || ATGT || 6 || - || 50 || Absent  
| 4 || ATGT || 6 || - || 50 || Absent  
|-
| 4(34,256) || TAAT || 3 || - || 90,254 || Absent,Present
|-
|-
| 4 || GTGA || 7 || - || 137 || Absent  
| 4 || GTGA || 7 || - || 137 || Absent  
Line 407: Line 453:
| 5(58) || TGTCC || 1 || - || 27 || Absent  
| 5(58) || TGTCC || 1 || - || 27 || Absent  
|-
|-
| 5(59) || ACGTG || 15 || - || 27 || Absent  
| 5(59) || ACGTG || 15 || - || 27,37 || Absent,Present
|-
|-
| 5(60) || CGTGT || 5 || - || 27 || Absent  
| 5(60) || CGTGT || 5 || - || 27 || Absent  
Line 435: Line 481:
| 5(72) || GTGAA || 3 || 3.38 ± 1.72 || 137 || Absent  
| 5(72) || GTGAA || 3 || 3.38 ± 1.72 || 137 || Absent  
|-
|-
| 5(73) || ATGTG || 3 || 3.33 ± 1.55 || 137 || Absent  
| 5(73,1024) || ATGTG || 3 || 3.33 ± 1.55 || 137 || Absent  
|-
|-
| 6 || TATAAA || 2 || 2.0 || 1 || Present  
| 6 || TATAAA || 2 || 2.0 || 1 || Present  
Line 555: Line 601:
| 6 || TGTGAA || 2 || 2.10 ± 1.35 || 137 || Absent  
| 6 || TGTGAA || 2 || 2.10 ± 1.35 || 137 || Absent  
|-
|-
| 6(24) || TGAAAT || 3 || 2.36 ± 1.32 || 137 || Absent  
| 6(24,4096) || TGAAAT || 3 || 2.36 ± 1.32 || 137 || Absent  
|-
|-
| 7(1) || TATAAAA || 1 || 1.0 ± 0.0 || 1 || Present  
| 7(1) || TATAAAA || 1 || 1.0 ± 0.0 || 1 || Present  
Line 657: Line 703:
| 7(50) || TTCACAT || 1 || - || 138 || Present  
| 7(50) || TTCACAT || 1 || - || 138 || Present  
|-
|-
| 7(51) || TCACATG || 1 || - || 138 || Present  
| 7(51,16384) || TCACATG || 1 || - || 138 || Present  
|-
|-
| 8(1) || GTTGGCAT || 1 || - || 12 || Absent  
| 8(1) || GTTGGCAT || 1 || - || 12 || Absent  
Line 729: Line 775:
| 8(32) || TGTGAAAT || 2 || - || 137 || Absent  
| 8(32) || TGTGAAAT || 2 || - || 137 || Absent  
|-
|-
| 8(33) || TTCACATG || 1 || 1.2 ± 0.32 || 138 || Present  
| 8(33,65536) || TTCACATG || 1 || 1.2 ± 0.32 || 138 || Present  
|-
|-
| 9 || CATGGCAAC || 1 || 1.0 || 12 || Absent  
| 9 || CATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 779: Line 825:
| 9(22) || GAGGCCATC || 1 || 1.0 || 33 || Absent  
| 9(22) || GAGGCCATC || 1 || 1.0 || 33 || Absent  
|-
|-
| 9(23) || AGGCCATCT || 1 || 1.0 || 33 || Absent  
| 9(23,262144) || AGGCCATCT || 1 || 1.0 || 33 || Absent  
|-
|-
| 10(1) || GCATGGCAAC || 1 || 1.0 || 12 || Absent  
| 10(1) || GCATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 813: Line 859:
| 10(16) || GGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 10(16) || GGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 10(17) || GAGGCCATCT || 1 || 1.0 || 33 || Absent  
| 10(17,1048576) || GAGGCCATCT || 1 || 1.0 || 33 || Absent  
|-
|-
| 11 || GGCATGGCAAC || 1 || 1.0 || 12 || Absent  
| 11 || GGCATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 839: Line 885:
| 11 || TTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 11 || TTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 11(13) || TGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 11(13,4194304) || TGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 12 || TGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
| 12 || TGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 859: Line 905:
| 12 || GTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 12 || GTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 12(10) || TTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 12(10,16777216) || TTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 13 || TTGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
| 13 || TTGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 873: Line 919:
| 13 || CGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 13 || CGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 13(7) || GTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 13(7,67108864) || GTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 14 || GTTGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
| 14 || GTTGGCATGGCAAC || 1 || 1.0 || 12 || Absent  
Line 883: Line 929:
| 14 || TCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 14 || TCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 14(5) || CGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 14(5,268435456) || CGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 15 || TTTCGTTGGAAGCGG || 1 || 1.0 || 16 || Absent  
| 15 || TTTCGTTGGAAGCGG || 1 || 1.0 || 16 || Absent  
Line 889: Line 935:
| 15 || TTCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 15 || TTCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 15(3) || TCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 15(3,1073741824) || TCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 16 || TTCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 16 || TTCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|-
|-
| 16(2) || TTTCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
| 16(2,4294967296) || TTTCGTTGGAAGCGGG || 1 || 1.0 || 16 || Absent  
|-
|-
| 17(1) || TTTCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
| 17(1,17179869184) || TTTCGTTGGAAGCGGGA || 1 || 1.0 || 16 || Absent  
|}
|}


Revision as of 19:59, 10 March 2024

Tabulation of counts

Number of non-degenerate nucleotides versus number of response elements
Number of nucleotides Letters of nucleotides Number of response elements Average ± deviation Order of list Present or Absent
1 A 295 295.0 ± 0.0 1 Present
1 T 285 - 1 Present
1 G 286 - 3 Present
1(4) C 300 291.5 ± 6 5, 134 Absent, Present
2 AA 105 105 ± 0.0 1 Present
2 AT 105 105 ± 0.0 1 Present
2 TA 74 - 1 Present
2 AC 103 - 5 Absent
2 CG 102 - 5 Absent
2 CA 136 - 7 Present
2 TG 112 - 7 Present
2 AG 63 - 8 Present
2 CC 101 - 8 Present
2 GC 74 - 8 Present
2 CT 67 - 11 Absent
2 GG 92 - 12 Absent
2 GT 106 - 12 Absent
2 TT 91 - 12 Absent
2 TC 122 - 14 Absent
2(16,16) GA 106 97.4 ± 15.5 16 Absent
3(1) TAT 20 20.0 ± 0.0 1 Present
3(2) ATA 23 - 1 Present
3(3) TAA 24 - 1 Present
3(4) AAA 35 - 1 Present
3(5) AAC 22 - 5, 80 Absent, Present
3(6) ACG 39 - 5 Absent
3(7) AGC 8 - 8 Present
3(8) GCC 30 - 8 Present
3(9) CCG 21 - 8 Present
3(10) CTA 11 - 11 Absent
3(11) ACC 25 - 11 Absent
3(12) GTT 17 - 12 Absent
3(13) GGC 25 - 12 Absent
3(14) TTG 13 - 12 Absent
3(15) GCA 10 - 12 Absent
3(16) CAA 24 - 12 Absent
3(17) TGG 19 - 12 Absent
3(18) CAT 32 - 12 Absent
3(19) ATG 17 - 12 Absent
3(20) CCA 36 - 14 Absent
3(21) AAT 23 - 14 Absent
3(22) ATC 25 - 14 Absent
3(23) TTA 16 - 15 Absent
3(24) CCC 25 - 15 Absent
3(25) CCT 18 - 15 Absent
3(26) TAC 15 - 15 Absent
3(27) TTT 18 - 16 Absent
3(28) TCG 11 - 16 Absent
3(29) GGA 16 - 16 Absent
3(30) GCG 24 - 16 Absent
3(31) CGT 40 - 16 Absent
3(32) CGG 25 - 16 Absent
3(33) GAA 37 - 16 Absent
3(34) TTC 43 - 16 Absent
3(35) GGG 18 - 16 Absent
3(36) TCC 27 - 18 & 19 Absent
3(37) CAC 34 - 18 & 19 Absent
3(38) TGA 36 - 20 Absent
3(39) TCA 43 - 20 Absent
3(40) GAC 24 - 21 Absent
3(41) ACA 20 - 21 Absent
3(42) CGA 14 - 21 Absent
3(43) GTG 39 - 22 Absent
3(44) GGT 27 - 22 Absent
3(45) GAT 24,1092 24.21 ± 12.42 28 Absent
3(46) - - - - -
3(47) - - - - -
3(48) - - - - -
3(49) - - - - -
3(50) - - - - -
3(51) - - - - -
3(52) - - - - -
3(53) - - - - -
3(54) - - - - -
3(55) - - - - -
3(56) - - - - -
3(57) - - - - -
3(58) - - - - -
3(59) - - - - -
3(60) - - - - -
3(61) - - - - -
3(62) - - - - -
3(63) - - - - -
3(64,64) - - - - -
4(1) AAAA 6 6.0 ± 0.0 1 Present
4 TAAA 6 6.0 ± 0.0 1 Present
4 ATAA 10 7.33 ± 1.78 1 Present
4 TATA 8 7.5 ± 1.5 1 Present
4 AACG 4 6.8 ± 1.76 5 Absent
4 AGCC 2 6.0 ± 2.00 8 Present
4 GCCG 4 - 8 Present
4 CCGC 10 - 8 Present
4 CGCC 11 - 8 Present
4 CTAA 5 - 11 Absent
4 AACC 4 - 11 Absent
4 TAAC 6 - 11 Absent
4 GCAA 2 - 12 Absent
4 GTTG 3 - 12 Absent
4 TTGG 4 - 12 Absent
4 TGGC 6 - 12 Absent
4 GGCA 3 - 12 Absent
4 GCAT 5 - 12 Absent
4 CATG 7 - 12 Absent
4 ATGG 4 - 12 Absent
4 CAAC 3 - 12 Absent
4 CCAA 10 - 14 Absent
4 CCTT 2 - 15 Absent
4 TTAC 4 - 15 Absent
4 ACCC 7 - 15 Absent
4 CCCC 9 - 15 Absent
4 CCCT 10 - 15 Absent
4 TGGA 1 - 16 Absent
4 AAGC 1 - 16 Absent
4 TTTC 9 - 16 Absent
4 TTCG 4 - 16 Absent
4 TCGT 3 - 16 Absent
4 CGTT 3 - 16 Absent
4 GTTG 3 - 16 Absent
4 GGAA 4 - 16 Absent
4 GAAG 2 - 16 Absent
4 AGCG 2 - 16 Absent
4 GCGG 9 - 16 Absent
4 CGGG 4 - 16 Absent
4 GGGA 2 - 16 Absent
4 CCAC 12 - 18 & 19 Absent
4 TCCA 9 - 18 & 19 Absent
4 ATCC 6 - 18 & 19 Absent
4 TATC 6 - 18 & 19 Absent
4 ACCG 5 - 21 Absent
4 CCGA 3 - 21 Absent
4 CGAC 4 - 21 Absent
4 GACA 4 - 21 Absent
4 ACAT 4 - 21 Absent
4 AGTG 4 - 22 Absent
4 GAGT 4 - 22 Absent
4 GTGG 7 - 22 Absent
4 TGGT 4 - 22 Absent
4 GGTG 6 - 22 Absent
4 GTGA 8 - 22 Absent
4 GAGT 4 - 23 Absent
4 TGAG 5 - 23 Absent
4 AGTC 5 - 23 Absent
4 GTCA 12 - 23 Absent
4 TTCT 7 - 25 Absent
4 TCTC 6 - 25 Absent
4 CTCT 3 - 25 Absent
4 CGTA 4 - 26 Absent
4 ACGT 24 - 26 Absent
4 TACG 4 - 26 Absent
4 CGTG 27 - 27 Absent
4 GTGT 6 - 27 Absent
4 TGTC 7 - 27 Absent
4 GTCC 2 - 27 Absent
4 ATCG 2 - 28 Absent
4 CGAT 3 - 28 Absent
4 GATC 4 - 28 Absent
4 TCGA 4 - 28 Absent
4 GTAT 3 - 32 Absent
4 GACG 8 - 32 Absent
4 TGAC 15 - 32 Absent
4 ATGT 6 - 50 Absent
4(34,256) TAAT 3 - 90,254 Absent,Present
4 GTGA 7 - 137 Absent
4 TGAA 5 - 137 Absent
4 GAAA 14 - 137 Absent
4(33) AAAT 8 7.64 ± 2.63 137 Absent
5(1) ATAAA 3 0.0 ± 0.0 1 Present
5(2) TATAA 4 3.5 ± 0.5 1 Present
5(3) TAAAA 1 2.67 1 Present
5(4) AGCCG 1 2.25 8 Present
5(5) GCCGC 4 2.60 ± 1.28 8 Present
5(6) CCGCC 9 3.67 ± 2 8 Present
5(7) CTAAC 1 - 11 Absent
5(8) TAACC 2 - 11 Absent
5(9) GGCAT 1 - 12 Absent
5(10) ATGGC 1 - 12 Absent
5(11) GCAAC 1 - 12 Absent
5(12) TGGCA 2 - 12 Absent
5(13) GGCAA 2 - 12 Absent
5(14) GTTGG 2 - 12 Absent
5(15) TTGGC 2 - 12 Absent
5(16) GCATG 2 - 12 Absent
5(17) CATGG 2 - 12 Absent
5(18) CAATC 2 - 14 Absent
5(19) CCAAT 5 - 14 Absent
5(20) TTACC 3 - 15 Absent
5(21) TACCC 3 - 15 Absent
5(22) CCCTT 2 - 15 Absent
5(23) ACCCC 2 - 15 Absent
5(24) CCCCC 3 - 15 Absent
5(25) CCCCT 4 - 15 Absent
5(26) TTCGT 1 - 16 Absent
5(27) TCGTT 1 - 16 Absent
5(28) CGTTG 1 - 16 Absent
5(29) TTGGA 1 - 16 Absent
5(30) TGGAA 1 - 16 Absent
5(31) GAAGC 1 - 16 Absent
5(32) AAGCG 1 - 16 Absent
5(33) AGCGG 1 - 16 Absent
5(34) CGGGA 1 - 16 Absent
5(35) TTTCG 2 - 16 Absent
5(36) GGAAG 2 - 16 Absent
5(37) GCGGG 3 - 16 Absent
5(38) TATCC 5 - 18 & 19 Absent
5(39) ATCCA 5 - 18 & 19 Absent
5(40) TCCAC 5 - 18 & 19 Absent
5(41) TACCG 1 - 21 Absent
5(42) ACCGA 1 - 21 Absent
5(43) CGACA 1 - 21 Absent
5(44) CCGAC 2 - 21 Absent
5(45) GACAT 2 - 21 Absent
5(46) GAGTG 2 - 22 Absent
5(47) GTGGT 1 - 22 Absent
5(48) AGTGG 2 - 22 Absent
5(49) TGGTG 2 - 22 Absent
5(50) GGTGA 3 - 22 Absent
5(51) GAGTC 1 - 23 Absent
5(52) TGAGT 4 - 23 Absent
5(53) AGTCA 3 - 23 Absent
5(54) TTCTC 1 - 25 Absent
5(55) TCTCT 1 - 25 Absent
5(56) TACGT 3 - 26 Absent
5(57) ACGTA 3 - 26 Absent
5(58) TGTCC 1 - 27 Absent
5(59) ACGTG 15 - 27,37 Absent,Present
5(60) CGTGT 5 - 27 Absent
5(61) GTGTC 3 - 27 Absent
5(62) CGATC 1 - 28 Absent
5(63) GATCG 1 - 28 Absent
5(64) CGATC 1 - 28 Absent
5(65) ATCGAT 2 - 28 Absent
5(66) TCGAT 2 - 28 Absent
5(67) ACGAT 1 - 31 Absent
5(68) TGACG 7 - 32 Absent
5(69) GACGT 7 - 32 Absent
5(70) CGTAT 2 - 32 Absent
5(71) TGTGA 2 3.43 ± 1.92 137 Absent
5(72) GTGAA 3 3.38 ± 1.72 137 Absent
5(73,1024) ATGTG 3 3.33 ± 1.55 137 Absent
6 TATAAA 2 2.0 1 Present
6 ATAAAA 1 1.5 1 Present
6 AGCCGC 1 - 8 Present
6 GCCGCC 4 2.375 ± 1.563 8 Present
6 CTAACC 1 1.5 11 Absent
6 GTTGGC 1 - 12 Absent
6 TTGGCA 1 - 12 Absent
6 TGGCAT 1 - 12 Absent
6 GGCATG 1 - 12 Absent
6 GCATGG 1 - 12 Absent
6 CATGGC 1 - 12 Absent
6 ATGGCA 1 - 12 Absent
6 GGCAAC 1 - 12 Absent
6 TGGCAA 2 - 12 Absent
6 CCAATC 2 - 14 Absent
6 TACCCC 1 - 15 Absent
6 ACCCCC 1 - 15 Absent
6 CCCCCC 1 - 15 Absent
6 CCCCCT 1 - 15 Absent
6 TTACCC 3 - 15 Absent
6 CCCCTT 2 - 15 Absent
6 TTTCGT 1 - 16 Absent
6 TTCGTT 1 - 16 Absent
6 TCGTTG 1 - 16 Absent
6 CGTTGG 1 - 16 Absent
6 GTTGGA 1 - 16 Absent
6 TTGGAA 1 - 16 Absent
6 TGGAAG 1 - 16 Absent
6 GGAAGC 1 - 16 Absent
6 GAAGCG 1 - 16 Absent
6 AAGCGG 1 - 16 Absent
6 AGCGGG 1 - 16 Absent
6 GCGGGA 1 - 16 Absent
6 TATCCA 5 - 18 & 19 Absent
6 ATCCAC 5 - 18 & 19 Absent
6 TACCGA 1 - 21 Absent
6 ACCGAC 1 - 21 Absent
6 CCGACA 1 - 21 Absent
6 CGACAT 1 - 21 Absent
6 AGTGGT 1 - 22 Absent
6 GTGGTG 1 - 22 Absent
6 GAGTGG 2 - 22 Absent
6 TGGTGA 2 - 22 Absent
6 TGAGTC 1 - 23 Absent
6 GAGTCA 1 - 23 Absent
6 TTCTCT 1 - 25 Absent
6 TACGTA 1 - 26 Absent
6 GTGTCC 1 - 27 Absent
6 ACGTGT 3 - 27 Absent
6 CGTGTC 2 - 27 Absent
6 CGATCG 1 - 28 Absent
6 GATCGA 1 - 28 Absent
6 TCGATC 1 - 28 Absent
6 ATCGAT 2 - 28 Absent
6(40) TGACGT 6 - 32 Absent
6(40) GACGTA 1 - 32 Absent
6(41) ACGTAT 1 - 32 Absent
6 ATGTGA 2 2.222 ± 1.592 137 Absent
6 TGTGAA 2 2.10 ± 1.35 137 Absent
6(24,4096) TGAAAT 3 2.36 ± 1.32 137 Absent
7(1) TATAAAA 1 1.0 ± 0.0 1 Present
7(2) AGCCGCC 1 1.0 ± 0.0 8 Present
7(3) GTTGGCA 1 1.0 ± 0.0 12 Absent
7(4) TTGGCAT 1 1.0 ± 0.0 12 Absent
7(5) TGGCATG 1 1.0 ± 0.0 12 Absent
7(6) GGCATGG 1 1.0 ± 0.0 12 Absent
7(7) GCATGGC 1 1.0 ± 0.0 12 Absent
7(8) CATGGCA 1 1.0 ± 0.0 12 Absent
7(9) ATGGCAA 1 1.0 ± 0.0 12 Absent
7(10) TGGCAAC 1 1.0 ± 0.0 12 Absent
7(11) TTACCCC 1 1.0 ± 0.0 15 Absent
7(12) TACCCCC 1 1.0 ± 0.0 15 Absent
7(13) ACCCCCC 1 1.0 ± 0.0 15 Absent
7(14) CCCCCCC 1 1.0 ± 0.0 15 Absent
7(15) CCCCCCT 1 1.0 ± 0.0 15 Absent
7(16) CCCCCTT 1 1.0 ± 0.0 15 Absent
7(17) TTTCGTT 1 1.0 ± 0.0 16 Absent
7(18) TTCGTTG 1 1.0 ± 0.0 16 Absent
7(19) TCGTTGG 1 1.0 ± 0.0 16 Absent
7(20) CGTTGGA 1 1.0 ± 0.0 16 Absent
7(21) GTTGGAA 1 1.0 ± 0.0 16 Absent
7(22) TTGGAAG 1 1.0 ± 0.0 16 Absent
7(23) TGGAAGC 1 1.0 ± 0.0 16 Absent
7(24) GGAAGCG 1 1.0 ± 0.0 16 Absent
7(25) GAAGCGG 1 1.0 ± 0.0 16 Absent
7(26) AAGCGGG 1 1.0 ± 0.0 16 Absent
7(27) AGCGGGA 1 1.0 ± 0.0 16 Absent
7(28) TATCCAC 1 1.0 ± 0.0 18 & 19 Absent
7(29) TACCGAC 1 - 21 Absent
7(30) ACCGACA 1 - 21 Absent
7(31) CCGACAT 1 - 21 Absent
7(32) GAGTGGT 1 - 22 Absent
7(33) AGTGGTG 1 - 22 Absent
7(34) GTGGTGA 1 - 22 Absent
7(35) TGAGTCA 1 - 23 Absent
7(36) ACGTGTC 1 - 27 Absent
7(37) CGTGTCC 1 - 27 Absent
7(37) CGATCGA 1 - 28 Absent
7(38) GATCGAT 1 - 28 Absent
7(39) ATCGATC 1 - 28 Absent
7(40) TGACGTA 1 - 32 Absent
7(41) GACGTAT 1 - 32 Absent
7(42) GAGGCCA 1 1.0 33 Absent
7(43) AGGCCAT 1 1.0 33 Absent
7(44) GGCCATC 1 1.0 33 Absent
7(46) GCCATCT 1 1.0 33 Absent
7(47) ATGTGAA 2 - 137 Absent
7(48) TGTGAAA 2 - 137 Absent
7(49) GTGAAAT 2 - 137 Absent
7(50) TTCACAT 1 - 138 Present
7(51,16384) TCACATG 1 - 138 Present
8(1) GTTGGCAT 1 - 12 Absent
8(2) TTGGCATG 1 - 12 Absent
8(3) TGGCATGG 1 - 12 Absent
8(4) GGCATGGC 1 - 12 Absent
8(5) GCATGGCA 1 - 12 Absent
8(6) CATGGCAA 1 - 12 Absent
8(7) ATGGCAAC 1 - 12 Absent
8(8) TTACCCCC 1 1.0 15 Absent
8(9) TACCCCCC 1 1.0 15 Absent
8(10) ACCCCCCC 1 1.0 15 Absent
8(11) CCCCCCCT 1 1.0 15 Absent
8(12) CCCCCCTT 1 1.0 15 Absent
8(13) TTTCGTTG 1 1.0 16 Absent
8(14) TTCGTTGG 1 1.0 16 Absent
8(15) TCGTTGGA 1 1.0 16 Absent
8(16) CGTTGGAA 1 1.0 16 Absent
8(17) GTTGGAAG 1 1.0 16 Absent
8(18) TTGGAAGC 1 1.0 16 Absent
8(19) TGGAAGCG 1 1.0 16 Absent
8(20) GGAAGCGG 1 1.0 16 Absent
8(21) GAAGCGGG 1 1.0 16 Absent
8(22) AAGCGGGA 1 1.0 16 Absent
8(23) TACCGACA 1 - 21 Absent
8(24) ACCGACAT 1 - 21 Absent
8(25) GAGTGGTG 1 - 22 Absent
8(26) AGTGGTGA 1 - 22 Absent
8(27) ACGTGTCC 1 - 27 Absent
8(28) CGATCGAT 1 - 28 Absent
8(29) GATCGATC 1 - 28 Absent
8(27) TGACGTAT 1 - 32 Absent
8(28) GAGGCCAT 1 1.0 33 Absent
8(29) AGGCCATC 1 1.0 33 Absent
8(30) GGCCATCT 1 1.0 33 Absent
8(31) ATGTGAAA 2 - 137 Absent
8(32) TGTGAAAT 2 - 137 Absent
8(33,65536) TTCACATG 1 1.2 ± 0.32 138 Present
9 CATGGCAAC 1 1.0 12 Absent
9 GCATGGCAA 1 1.0 12 Absent
9 GGCATGGCA 1 1.0 12 Absent
9 TGGCATGGC 1 1.0 12 Absent
9 TTGGCATGG 1 1.0 12 Absent
9 GTTGGCATG 1 1.0 12 Absent
9 TTACCCCCC 1 1.0 15 Absent
9 TACCCCCCC 1 1.0 15 Absent
9 ACCCCCCCT 1 1.0 15 Absent
9 CCCCCCCTT 1 1.0 15 Absent
9 TTTCGTTGG 1 1.0 16 Absent
9 TTCGTTGGA 1 1.0 16 Absent
9 TCGTTGGAA 1 1.0 16 Absent
9 CGTTGGAAG 1 1.0 16 Absent
9 GTTGGAAGC 1 1.0 16 Absent
9 TTGGAAGCG 1 1.0 16 Absent
9 TGGAAGCGG 1 1.0 16 Absent
9 GGAAGCGGG 1 1.0 16 Absent
9 GAAGCGGGA 1 1.0 16 Absent
9 TACCGACAT 1 - 21 Absent
9 GAGTGGTGA 1 - 22 Absent
9 CGATCGATC 1 - 28 Absent
9(21) ATGTGAAAT 2 1.14 ± 0.24 137 Absent
9(22) GAGGCCATC 1 1.0 33 Absent
9(23,262144) AGGCCATCT 1 1.0 33 Absent
10(1) GCATGGCAAC 1 1.0 12 Absent
10(2) GGCATGGCAA 1 1.0 12 Absent
10(3) TGGCATGGCA 1 1.0 12 Absent
10(4) TTGGCATGGC 1 1.0 12 Absent
10(5) GTTGGCATGG 1 1.0 12 Absent
10(6) TTACCCCCCC 1 1.0 15 Absent
10(7) TACCCCCCCT 1 1.0 15 Absent
10(8) ACCCCCCCTT 1 1.0 15 Absent
10(9) TTTCGTTGGA 1 1.0 16 Absent
10(10) TTCGTTGGAA 1 1.0 16 Absent
10(11) TCGTTGGAAG 1 1.0 16 Absent
10(12) CGTTGGAAGC 1 1.0 16 Absent
10(13) GTTGGAAGCG 1 1.0 16 Absent
10(14) TTGGAAGCGG 1 1.0 16 Absent
10(15) TGGAAGCGGG 1 1.0 16 Absent
10(16) GGAAGCGGGA 1 1.0 16 Absent
10(17,1048576) GAGGCCATCT 1 1.0 33 Absent
11 GGCATGGCAAC 1 1.0 12 Absent
11 TGGCATGGCAA 1 1.0 12 Absent
11 TTGGCATGGCA 1 1.0 12 Absent
11 GTTGGCATGGC 1 1.0 12 Absent
11 TTACCCCCCCT 1 1.0 15 Absent
11 TACCCCCCCTT 1 1.0 15 Absent
11 TTTCGTTGGAA 1 1.0 16 Absent
11 TTCGTTGGAAG 1 1.0 16 Absent
11 TCGTTGGAAGC 1 1.0 16 Absent
11 CGTTGGAAGCG 1 1.0 16 Absent
11 GTTGGAAGCGG 1 1.0 16 Absent
11 TTGGAAGCGGG 1 1.0 16 Absent
11(13,4194304) TGGAAGCGGGA 1 1.0 16 Absent
12 TGGCATGGCAAC 1 1.0 12 Absent
12 TTGGCATGGCAA 1 1.0 12 Absent
12 GTTGGCATGGCA 1 1.0 12 Absent
12 TTACCCCCCCTT 1 1.0 15 Absent
12 TTTCGTTGGAAG 1 1.0 16 Absent
12 TTCGTTGGAAGC 1 1.0 16 Absent
12 TCGTTGGAAGCG 1 1.0 16 Absent
12 CGTTGGAAGCGG 1 1.0 16 Absent
12 GTTGGAAGCGGG 1 1.0 16 Absent
12(10,16777216) TTGGAAGCGGGA 1 1.0 16 Absent
13 TTGGCATGGCAAC 1 1.0 12 Absent
13 GTTGGCATGGCAA 1 1.0 12 Absent
13 TTTCGTTGGAAGC 1 1.0 16 Absent
13 TTCGTTGGAAGCG 1 1.0 16 Absent
13 TCGTTGGAAGCGG 1 1.0 16 Absent
13 CGTTGGAAGCGGG 1 1.0 16 Absent
13(7,67108864) GTTGGAAGCGGGA 1 1.0 16 Absent
14 GTTGGCATGGCAAC 1 1.0 12 Absent
14 TTTCGTTGGAAGCG 1 1.0 16 Absent
14 TTCGTTGGAAGCGG 1 1.0 16 Absent
14 TCGTTGGAAGCGGG 1 1.0 16 Absent
14(5,268435456) CGTTGGAAGCGGGA 1 1.0 16 Absent
15 TTTCGTTGGAAGCGG 1 1.0 16 Absent
15 TTCGTTGGAAGCGGG 1 1.0 16 Absent
15(3,1073741824) TCGTTGGAAGCGGGA 1 1.0 16 Absent
16 TTCGTTGGAAGCGGGA 1 1.0 16 Absent
16(2,4294967296) TTTCGTTGGAAGCGGG 1 1.0 16 Absent
17(1,17179869184) TTTCGTTGGAAGCGGGA 1 1.0 16 Absent

Averages per Orders

Number of non-degenerate nucleotides versus number of response elements
Number of nucleotides (Totals) Letters of last Order nucleotides Number of last response elements Average ± average deviation Last Order of list
1(4) C 300 291.5 ± 6 5
2(16) GA 106 97.4 ± 15.5 16
3(38) CAC 34 29.9 ± 12.2 18
4(33) AAAT 8 7.64 ± 2.63 137
5(28) ATGTG 3 3.33 ± 1.55 137
6(24) TGAAAT 3 2.36 ± 1.32 137
7(21) TCACATG 1 1.23 ± 0.35 138
8(26) TTCACATG 1 1.2 ± 0.32 138
9(20) ATGTGAAAT 2 1.14 ± 0.24 137
10(16) GGAAGCGGGA 1 1.0 16
11(13) TGGAAGCGGGA 1 1.0 16
12(10) TTGGAAGCGGGA 1 1.0 16
13(7) GTTGGAAGCGGGA 1 1.0 16
14(5) GTTGGCATGGCAAC 1 1.0 16
15(3) TCGTTGGAAGCGGGA 1 1.0 16
16(2) TTTCGTTGGAAGCGGG 1 1.0 16
17(1) TTTCGTTGGAAGCGGGA 1 1.0 16
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