HIST1H1C: Difference between revisions

Jump to navigation Jump to search
m (Robot: Automated text replacement (-{{WikiDoc Cardiology Network Infobox}} +, -<references /> +{{reflist|2}}, -{{reflist}} +{{reflist|2}}))
 
m (Bot: HTTP→HTTPS)
 
Line 1: Line 1:
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{Infobox_gene}}
{{PBB_Controls
'''Histone H1.2''' is a [[protein]] that in humans is encoded by the ''HIST1H1C'' [[gene]].<ref name="pmid2759094">{{cite journal |vauthors=Eick S, Nicolai M, Mumberg D, Doenecke D | title = Human H1 histones: conserved and varied sequence elements in two H1 subtype genes | journal = Eur J Cell Biol | volume = 49 | issue = 1 | pages = 110–5 |date=Sep 1989 | pmid = 2759094 | pmc =  | doi =  }}</ref><ref name="pmid12408966">{{cite journal |vauthors=Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ | title = The human and mouse replication-dependent histone genes | journal = Genomics | volume = 80 | issue = 5 | pages = 487–98 |date=Oct 2002 | pmid = 12408966 | pmc =  | doi =10.1016/S0888-7543(02)96850-3 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: HIST1H1C histone cluster 1, H1c| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3006| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}
 
<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image =
| image_source = 
| PDB =
| Name = Histone cluster 1, H1c
| HGNCid = 4716
| Symbol = HIST1H1C
| AltSymbols =; H1.2; H1F2; MGC3992
| OMIM = 142710
| ECnumber =
| Homologene = 68455
| MGIid = 1931526
| GeneAtlas_image1 = PBB_GE_HIST1H1C_209398_at_tn.png
  | Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0005515 |text = protein binding}}
  | Component = {{GNF_GO|id=GO:0000786 |text = nucleosome}} {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005694 |text = chromosome}}
| Process = {{GNF_GO|id=GO:0006334 |text = nucleosome assembly}} {{GNF_GO|id=GO:0007001 |text = chromosome organization and biogenesis (sensu Eukaryota)}} {{GNF_GO|id=GO:0016584 |text = nucleosome positioning}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 3006
    | Hs_Ensembl = ENSG00000187837
    | Hs_RefseqProtein = NP_005310
    | Hs_RefseqmRNA = NM_005319
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 6
    | Hs_GenLoc_start = 26163994
    | Hs_GenLoc_end = 26164635
    | Hs_Uniprot = P16403
    | Mm_EntrezGene = 50708
    | Mm_Ensembl = ENSMUSG00000036181
    | Mm_RefseqmRNA = NM_015786
    | Mm_RefseqProtein = NP_056601
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 13
    | Mm_GenLoc_start = 23746272
    | Mm_GenLoc_end = 23747831
    | Mm_Uniprot = Q3UXH2
  }}
}}
'''Histone cluster 1, H1c''', also known as '''HIST1H1C''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: HIST1H1C histone cluster 1, H1c| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3006| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6.<ref name="entrez">{{cite web | title = Entrez Gene: HIST1H1C histone cluster 1, H1c| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=3006| accessdate = }}</ref>
| summary_text = Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6.<ref name="entrez" />
}}
}}
Apart from its roles in the nucleus, histone H1.2 also participates in apoptosis. In response to apoptotic stimuli, mainly DNA damage, it is translocated from the nucleus to the cytosol. There, it activates Bak, a pro-apoptotic protein bound to the mithochondria outer membrane (MOM). Activation of Bak causes the perforation of the mitochondria, a process known as MOMP (mitochondria outer membrane permeabilization) which promotes apoptosis. Histone H1.2 also forms a complex with the apoptosome, possibly regulating its formation.


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Ohe Y, Hayashi H, Iwai K |title=Human spleen histone H1. Isolation and amino acid sequences of three minor variants, H1a, H1c, and H1d. |journal=J. Biochem. |volume=106 |issue= 5 |pages= 844-57 |year= 1990 |pmid= 2613692 |doi=  }}
*{{cite journal  |vauthors=Ohe Y, Hayashi H, Iwai K |title=Human spleen histone H1. Isolation and amino acid sequences of three minor variants, H1a, H1c, and H1d. |journal=J. Biochem. |volume=106 |issue= 5 |pages= 844–57 |year= 1990 |pmid= 2613692 |doi=  }}
*{{cite journal  | author=Eick S, Nicolai M, Mumberg D, Doenecke D |title=Human H1 histones: conserved and varied sequence elements in two H1 subtype genes. |journal=Eur. J. Cell Biol. |volume=49 |issue= 1 |pages= 110-5 |year= 1989 |pmid= 2759094 |doi=  }}
*{{cite journal  |vauthors=Eilers A, Bouterfa H, Triebe S, Doenecke D |title=Role of a distal promoter element in the S-phase control of the human H1.2 histone gene transcription. |journal=Eur. J. Biochem. |volume=223 |issue= 2 |pages= 567–74 |year= 1994 |pmid= 8055927 |doi=10.1111/j.1432-1033.1994.tb19026.x }}
*{{cite journal  | author=Eilers A, Bouterfa H, Triebe S, Doenecke D |title=Role of a distal promoter element in the S-phase control of the human H1.2 histone gene transcription. |journal=Eur. J. Biochem. |volume=223 |issue= 2 |pages= 567-74 |year= 1994 |pmid= 8055927 |doi=  }}
*{{cite journal   |vauthors=Albig W, Drabent B, Kunz J, etal |title=All known human H1 histone genes except the H1(0) gene are clustered on chromosome 6. |journal=Genomics |volume=16 |issue= 3 |pages= 649–54 |year= 1993 |pmid= 8325638 |doi= 10.1006/geno.1993.1243 }}
*{{cite journal | author=Albig W, Drabent B, Kunz J, ''et al.'' |title=All known human H1 histone genes except the H1(0) gene are clustered on chromosome 6. |journal=Genomics |volume=16 |issue= 3 |pages= 649-54 |year= 1993 |pmid= 8325638 |doi= 10.1006/geno.1993.1243 }}
*{{cite journal  |vauthors=Albig W, Doenecke D |title=The human histone gene cluster at the D6S105 locus. |journal=Hum. Genet. |volume=101 |issue= 3 |pages= 284–94 |year= 1998 |pmid= 9439656 |doi=10.1007/s004390050630 }}
*{{cite journal  | author=Albig W, Doenecke D |title=The human histone gene cluster at the D6S105 locus. |journal=Hum. Genet. |volume=101 |issue= 3 |pages= 284-94 |year= 1998 |pmid= 9439656 |doi=  }}
*{{cite journal   |vauthors=Richardson RT, Batova IN, Widgren EE, etal |title=Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein. |journal=J. Biol. Chem. |volume=275 |issue= 39 |pages= 30378–86 |year= 2000 |pmid= 10893414 |doi= 10.1074/jbc.M003781200 }}
*{{cite journal | author=Richardson RT, Batova IN, Widgren EE, ''et al.'' |title=Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein. |journal=J. Biol. Chem. |volume=275 |issue= 39 |pages= 30378-86 |year= 2000 |pmid= 10893414 |doi= 10.1074/jbc.M003781200 }}
*{{cite journal  |vauthors=Parseghian MH, Newcomb RL, Winokur ST, Hamkalo BA |title=The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: distribution in human fetal fibroblasts. |journal=Chromosome Res. |volume=8 |issue= 5 |pages= 405–24 |year= 2001 |pmid= 10997781 |doi=10.1023/A:1009262819961 }}
*{{cite journal  | author=Parseghian MH, Newcomb RL, Winokur ST, Hamkalo BA |title=The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: distribution in human fetal fibroblasts. |journal=Chromosome Res. |volume=8 |issue= 5 |pages= 405-24 |year= 2001 |pmid= 10997781 |doi= }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }}
*{{cite journal  | author=Marzluff WF, Gongidi P, Woods KR, ''et al.'' |title=The human and mouse replication-dependent histone genes. |journal=Genomics |volume=80 |issue= 5 |pages= 487-98 |year= 2003 |pmid= 12408966 |doi= }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal   |vauthors=Garcia BA, Busby SA, Barber CM, etal |title=Characterization of phosphorylation sites on histone H1 isoforms by tandem mass spectrometry. |journal=J. Proteome Res. |volume=3 |issue= 6 |pages= 1219–27 |year= 2005 |pmid= 15595731 |doi= 10.1021/pr0498887 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal   |vauthors=Andersen JS, Lam YW, Leung AK, etal |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77–83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal | author=Garcia BA, Busby SA, Barber CM, ''et al.'' |title=Characterization of phosphorylation sites on histone H1 isoforms by tandem mass spectrometry. |journal=J. Proteome Res. |volume=3 |issue= 6 |pages= 1219-27 |year= 2005 |pmid= 15595731 |doi= 10.1021/pr0498887 }}
*{{cite journal   |vauthors=Duce JA, Smith DP, Blake RE, etal |title=Linker histone H1 binds to disease associated amyloid-like fibrils. |journal=J. Mol. Biol. |volume=361 |issue= 3 |pages= 493–505 |year= 2006 |pmid= 16854430 |doi= 10.1016/j.jmb.2006.06.038 }}
*{{cite journal | author=Andersen JS, Lam YW, Leung AK, ''et al.'' |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77-83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal   |vauthors=Olsen JV, Blagoev B, Gnad F, etal |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635–48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
*{{cite journal | author=Duce JA, Smith DP, Blake RE, ''et al.'' |title=Linker histone H1 binds to disease associated amyloid-like fibrils. |journal=J. Mol. Biol. |volume=361 |issue= 3 |pages= 493-505 |year= 2006 |pmid= 16854430 |doi= 10.1016/j.jmb.2006.06.038 }}
*{{cite journal | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
}}
}}
{{refend}}
{{refend}}


{{protein-stub}}
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{WikiDoc Sources}}
{{PBB_Controls
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}
 
 
{{gene-6-stub}}

Latest revision as of 13:37, 31 August 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Histone H1.2 is a protein that in humans is encoded by the HIST1H1C gene.[1][2][3]

Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H1 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the large histone gene cluster on chromosome 6.[3]

Apart from its roles in the nucleus, histone H1.2 also participates in apoptosis. In response to apoptotic stimuli, mainly DNA damage, it is translocated from the nucleus to the cytosol. There, it activates Bak, a pro-apoptotic protein bound to the mithochondria outer membrane (MOM). Activation of Bak causes the perforation of the mitochondria, a process known as MOMP (mitochondria outer membrane permeabilization) which promotes apoptosis. Histone H1.2 also forms a complex with the apoptosome, possibly regulating its formation.

References

  1. Eick S, Nicolai M, Mumberg D, Doenecke D (Sep 1989). "Human H1 histones: conserved and varied sequence elements in two H1 subtype genes". Eur J Cell Biol. 49 (1): 110–5. PMID 2759094.
  2. Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ (Oct 2002). "The human and mouse replication-dependent histone genes". Genomics. 80 (5): 487–98. doi:10.1016/S0888-7543(02)96850-3. PMID 12408966.
  3. 3.0 3.1 "Entrez Gene: HIST1H1C histone cluster 1, H1c".

Further reading