DRAP1: Difference between revisions
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==Interactions== | ==Interactions== | ||
DRAP1 has been shown to [[Protein-protein interaction|interact]] with [[FOXH1]]<ref name=pmid12471260>{{cite journal |last=Iratni |first=Rabah |author2=Yan Yu-Ting |author3=Chen Canhe |author4=Ding Jixiang |author5=Zhang Yi |author6=Price Sandy M |author7=Reinberg Danny |author8=Shen Michael M |date=Dec 2002 |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1 |journal=[[Science (journal)|Science]] |volume=298 |issue=5600 |pages=1996–9 |publisher= |location = United States| issn = | pmid = 12471260 |doi = 10.1126/science.1073405 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> and [[DR1 (gene)|DR1]].<ref name=autogenerated1>{{cite journal |last=Mermelstein |first=F |author2=Yeung K |author3=Cao J |author4=Inostroza J A |author5=Erdjument-Bromage H |author6=Eagelson K |author7=Landsman D |author8=Levitt P |author9=Tempst P |author10=Reinberg D |date=Apr 1996 |title=Requirement of a corepressor for Dr1-mediated repression of transcription |journal=Genes Dev. |volume=10 |issue=8 |pages=1033–48 |publisher= |location = UNITED STATES| issn = 0890-9369| pmid = 8608938 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1101/gad.10.8.1033 }}</ref><ref name=pmid8972183>{{cite journal |last=Yeung |first=K |author2=Kim S |author3=Reinberg D |date=Jan 1997 |title=Functional dissection of a human Dr1-DRAP1 repressor complex |journal=Mol. Cell. Biol. |volume=17 |issue=1 |pages=36–45 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 8972183 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=231727 }}</ref> | DRAP1 has been shown to [[Protein-protein interaction|interact]] with [[FOXH1]]<ref name=pmid12471260>{{cite journal |last=Iratni |first=Rabah |author2=Yan Yu-Ting |author3=Chen Canhe |author4=Ding Jixiang |author5=Zhang Yi |author6=Price Sandy M |author7=Reinberg Danny |author8=Shen Michael M |date=Dec 2002 |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1 |journal=[[Science (journal)|Science]] |volume=298 |issue=5600 |pages=1996–9 |publisher= |location = United States| issn = | pmid = 12471260 |doi = 10.1126/science.1073405 | bibcode =2002Sci...298.1996I | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> and [[DR1 (gene)|DR1]].<ref name=autogenerated1>{{cite journal |last=Mermelstein |first=F |author2=Yeung K |author3=Cao J |author4=Inostroza J A |author5=Erdjument-Bromage H |author6=Eagelson K |author7=Landsman D |author8=Levitt P |author9=Tempst P |author10=Reinberg D |date=Apr 1996 |title=Requirement of a corepressor for Dr1-mediated repression of transcription |journal=Genes Dev. |volume=10 |issue=8 |pages=1033–48 |publisher= |location = UNITED STATES| issn = 0890-9369| pmid = 8608938 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1101/gad.10.8.1033 }}</ref><ref name=pmid8972183>{{cite journal |last=Yeung |first=K |author2=Kim S |author3=Reinberg D |date=Jan 1997 |title=Functional dissection of a human Dr1-DRAP1 repressor complex |journal=Mol. Cell. Biol. |volume=17 |issue=1 |pages=36–45 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 8972183 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=231727 }}</ref> | ||
==References== | ==References== | ||
| Line 21: | Line 21: | ||
*{{Cite journal | vauthors=Yeung K, Kim S, Reinberg D |title=Functional dissection of a human Dr1-DRAP1 repressor complex. |journal=Mol. Cell. Biol. |volume=17 |issue= 1 |pages= 36–45 |year= 1997 |pmid= 8972183 |doi= | pmc=231727 }} | *{{Cite journal | vauthors=Yeung K, Kim S, Reinberg D |title=Functional dissection of a human Dr1-DRAP1 repressor complex. |journal=Mol. Cell. Biol. |volume=17 |issue= 1 |pages= 36–45 |year= 1997 |pmid= 8972183 |doi= | pmc=231727 }} | ||
*{{Cite journal | vauthors=Ikeda K, Halle JP, Stelzer G |title=Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6. |journal=Mol. Cell. Biol. |volume=18 |issue= 1 |pages= 10–8 |year= 1998 |pmid= 9418848 |doi= 10.1128/mcb.18.1.10| pmc=121442 |display-authors=etal}} | *{{Cite journal | vauthors=Ikeda K, Halle JP, Stelzer G |title=Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6. |journal=Mol. Cell. Biol. |volume=18 |issue= 1 |pages= 10–8 |year= 1998 |pmid= 9418848 |doi= 10.1128/mcb.18.1.10| pmc=121442 |display-authors=etal}} | ||
*{{Cite journal | vauthors=Castaño E, Gross P, Wang Z |title=The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 13 |pages= 7184–9 |year= 2000 |pmid= 10852970 |doi= 10.1073/pnas.140202297 | pmc=16520 |display-authors=etal}} | *{{Cite journal | vauthors=Castaño E, Gross P, Wang Z |title=The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 13 |pages= 7184–9 |year= 2000 |pmid= 10852970 |doi= 10.1073/pnas.140202297 | pmc=16520 |display-authors=etal|bibcode=2000PNAS...97.7184C }} | ||
*{{Cite journal | vauthors=Kamada K, Shu F, Chen H |title=Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. |journal=Cell |volume=106 |issue= 1 |pages= 71–81 |year= 2001 |pmid= 11461703 |doi=10.1016/S0092-8674(01)00417-2 |display-authors=etal}} | *{{Cite journal | vauthors=Kamada K, Shu F, Chen H |title=Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. |journal=Cell |volume=106 |issue= 1 |pages= 71–81 |year= 2001 |pmid= 11461703 |doi=10.1016/S0092-8674(01)00417-2 |display-authors=etal}} | ||
*{{Cite journal | vauthors=Iratni R, Yan YT, Chen C |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1. |journal=Science |volume=298 |issue= 5600 |pages= 1996–9 |year= 2003 |pmid= 12471260 |doi= 10.1126/science.1073405 |display-authors=etal}} | *{{Cite journal | vauthors=Iratni R, Yan YT, Chen C |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1. |journal=Science |volume=298 |issue= 5600 |pages= 1996–9 |year= 2003 |pmid= 12471260 |doi= 10.1126/science.1073405 |display-authors=etal|bibcode=2002Sci...298.1996I }} | ||
*{{Cite journal | vauthors=Denko N, Wernke-Dollries K, Johnson AB |title=Hypoxia actively represses transcription by inducing negative cofactor 2 (Dr1/DrAP1) and blocking preinitiation complex assembly. |journal=J. Biol. Chem. |volume=278 |issue= 8 |pages= 5744–9 |year= 2003 |pmid= 12477712 |doi= 10.1074/jbc.M212534200 |display-authors=etal}} | *{{Cite journal | vauthors=Denko N, Wernke-Dollries K, Johnson AB |title=Hypoxia actively represses transcription by inducing negative cofactor 2 (Dr1/DrAP1) and blocking preinitiation complex assembly. |journal=J. Biol. Chem. |volume=278 |issue= 8 |pages= 5744–9 |year= 2003 |pmid= 12477712 |doi= 10.1074/jbc.M212534200 |display-authors=etal}} | ||
*{{Cite journal | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |display-authors=etal}} | *{{Cite journal | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |display-authors=etal|bibcode=2002PNAS...9916899M }} | ||
*{{Cite journal | vauthors=Leonard D, Ajuh P, Lamond AI, Legerski RJ |title=hLodestar/HuF2 interacts with CDC5L and is involved in pre-mRNA splicing. |journal=Biochem. Biophys. Res. Commun. |volume=308 |issue= 4 |pages= 793–801 |year= 2003 |pmid= 12927788 |doi=10.1016/S0006-291X(03)01486-4 }} | *{{Cite journal | vauthors=Leonard D, Ajuh P, Lamond AI, Legerski RJ |title=hLodestar/HuF2 interacts with CDC5L and is involved in pre-mRNA splicing. |journal=Biochem. Biophys. Res. Commun. |volume=308 |issue= 4 |pages= 793–801 |year= 2003 |pmid= 12927788 |doi=10.1016/S0006-291X(03)01486-4 }} | ||
*{{Cite journal | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}} | *{{Cite journal | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}} | ||
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*{{Cite journal | vauthors=Lewis BA, Sims RJ, Lane WS, Reinberg D |title=Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator. |journal=Mol. Cell |volume=18 |issue= 4 |pages= 471–81 |year= 2005 |pmid= 15893730 |doi= 10.1016/j.molcel.2005.04.005 }} | *{{Cite journal | vauthors=Lewis BA, Sims RJ, Lane WS, Reinberg D |title=Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator. |journal=Mol. Cell |volume=18 |issue= 4 |pages= 471–81 |year= 2005 |pmid= 15893730 |doi= 10.1016/j.molcel.2005.04.005 }} | ||
*{{Cite journal | vauthors=Stelzl U, Worm U, Lalowski M |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957–68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 |display-authors=etal}} | *{{Cite journal | vauthors=Stelzl U, Worm U, Lalowski M |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957–68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 |display-authors=etal}} | ||
*{{Cite journal | vauthors=Rual JF, Venkatesan K, Hao T |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |display-authors=etal}} | *{{Cite journal | vauthors=Rual JF, Venkatesan K, Hao T |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |display-authors=etal|bibcode=2005Natur.437.1173R }} | ||
*{{Cite journal | vauthors=Assmann EM, Alborghetti MR, Camargo ME, Kobarg J |title=FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region. |journal=J. Biol. Chem. |volume=281 |issue= 15 |pages= 9869–81 |year= 2006 |pmid= 16484223 |doi= 10.1074/jbc.M513280200 }} | *{{Cite journal | vauthors=Assmann EM, Alborghetti MR, Camargo ME, Kobarg J |title=FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region. |journal=J. Biol. Chem. |volume=281 |issue= 15 |pages= 9869–81 |year= 2006 |pmid= 16484223 |doi= 10.1074/jbc.M513280200 }} | ||
*{{Cite journal | vauthors=Lim J, Hao T, Shaw C |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. |journal=Cell |volume=125 |issue= 4 |pages= 801–14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 |display-authors=etal}} | *{{Cite journal | vauthors=Lim J, Hao T, Shaw C |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. |journal=Cell |volume=125 |issue= 4 |pages= 801–14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 |display-authors=etal}} | ||
*{{Cite journal | vauthors=Albert TK, Grote K, Boeing S |title=Global distribution of negative cofactor 2 subunit-alpha on human promoters. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=104 |issue= 24 |pages= 10000–5 |year= 2007 |pmid= 17548813 |doi= 10.1073/pnas.0703490104 | pmc=1891239 |display-authors=etal}} | *{{Cite journal | vauthors=Albert TK, Grote K, Boeing S |title=Global distribution of negative cofactor 2 subunit-alpha on human promoters. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=104 |issue= 24 |pages= 10000–5 |year= 2007 |pmid= 17548813 |doi= 10.1073/pnas.0703490104 | pmc=1891239 |display-authors=etal|bibcode=2007PNAS..10410000A }} | ||
}} | }} | ||
{{Refend}} | {{Refend}} | ||
Latest revision as of 07:29, 23 June 2018
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Dr1-associated corepressor is a protein that in humans is encoded by the DRAP1 gene.[1][2]
Transcriptional repression is a general mechanism for regulating transcriptional initiation in organisms ranging from yeast to humans. Accurate initiation of transcription from eukaryotic protein-encoding genes requires the assembly of a large multiprotein complex consisting of RNA polymerase II and general transcription factors such as TFIIA, TFIIB, and TFIID. DR1 is a repressor that interacts with the TATA-binding protein (TBP) of TFIID and prevents the formation of an active transcription complex by precluding the entry of TFIIA and/or TFIIB into the preinitiation complex. The protein encoded by this gene is a corepressor of transcription that interacts with DR1 to enhance DR1-mediated repression. The interaction between this corepressor and DR1 is required for corepressor function and appears to stabilize the TBP-DR1-DNA complex.[2]
Interactions
DRAP1 has been shown to interact with FOXH1[3] and DR1.[4][5]
References
- ↑ Mermelstein F, Yeung K, Cao J, Inostroza JA, Erdjument-Bromage H, Eagelson K, Landsman D, Levitt P, Tempst P, Reinberg D (May 1996). "Requirement of a corepressor for Dr1-mediated repression of transcription". Genes Dev. 10 (8): 1033–48. doi:10.1101/gad.10.8.1033. PMID 8608938.
- ↑ 2.0 2.1 "Entrez Gene: DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)".
- ↑ Iratni, Rabah; Yan Yu-Ting; Chen Canhe; Ding Jixiang; Zhang Yi; Price Sandy M; Reinberg Danny; Shen Michael M (Dec 2002). "Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1". Science. United States. 298 (5600): 1996–9. Bibcode:2002Sci...298.1996I. doi:10.1126/science.1073405. PMID 12471260.
- ↑ Mermelstein, F; Yeung K; Cao J; Inostroza J A; Erdjument-Bromage H; Eagelson K; Landsman D; Levitt P; Tempst P; Reinberg D (Apr 1996). "Requirement of a corepressor for Dr1-mediated repression of transcription". Genes Dev. UNITED STATES. 10 (8): 1033–48. doi:10.1101/gad.10.8.1033. ISSN 0890-9369. PMID 8608938.
- ↑ Yeung, K; Kim S; Reinberg D (Jan 1997). "Functional dissection of a human Dr1-DRAP1 repressor complex". Mol. Cell. Biol. UNITED STATES. 17 (1): 36–45. ISSN 0270-7306. PMC 231727. PMID 8972183.
Further reading
- Goppelt A, Stelzer G, Lottspeich F, Meisterernst M (1996). "A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodimeric histone fold domains". EMBO J. 15 (12): 3105–16. PMC 450253. PMID 8670811.
- Yeung K, Kim S, Reinberg D (1997). "Functional dissection of a human Dr1-DRAP1 repressor complex". Mol. Cell. Biol. 17 (1): 36–45. PMC 231727. PMID 8972183.
- Ikeda K, Halle JP, Stelzer G, et al. (1998). "Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6". Mol. Cell. Biol. 18 (1): 10–8. doi:10.1128/mcb.18.1.10. PMC 121442. PMID 9418848.
- Castaño E, Gross P, Wang Z, et al. (2000). "The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts". Proc. Natl. Acad. Sci. U.S.A. 97 (13): 7184–9. Bibcode:2000PNAS...97.7184C. doi:10.1073/pnas.140202297. PMC 16520. PMID 10852970.
- Kamada K, Shu F, Chen H, et al. (2001). "Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex". Cell. 106 (1): 71–81. doi:10.1016/S0092-8674(01)00417-2. PMID 11461703.
- Iratni R, Yan YT, Chen C, et al. (2003). "Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1". Science. 298 (5600): 1996–9. Bibcode:2002Sci...298.1996I. doi:10.1126/science.1073405. PMID 12471260.
- Denko N, Wernke-Dollries K, Johnson AB, et al. (2003). "Hypoxia actively represses transcription by inducing negative cofactor 2 (Dr1/DrAP1) and blocking preinitiation complex assembly". J. Biol. Chem. 278 (8): 5744–9. doi:10.1074/jbc.M212534200. PMID 12477712.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Leonard D, Ajuh P, Lamond AI, Legerski RJ (2003). "hLodestar/HuF2 interacts with CDC5L and is involved in pre-mRNA splicing". Biochem. Biophys. Res. Commun. 308 (4): 793–801. doi:10.1016/S0006-291X(03)01486-4. PMID 12927788.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- Klejman MP, Pereira LA, van Zeeburg HJ, et al. (2004). "NC2alpha interacts with BTAF1 and stimulates its ATP-dependent association with TATA-binding protein". Mol. Cell. Biol. 24 (22): 10072–82. doi:10.1128/MCB.24.22.10072-10082.2004. PMC 525489. PMID 15509807.
- Lewis BA, Sims RJ, Lane WS, Reinberg D (2005). "Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator". Mol. Cell. 18 (4): 471–81. doi:10.1016/j.molcel.2005.04.005. PMID 15893730.
- Stelzl U, Worm U, Lalowski M, et al. (2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j.cell.2005.08.029. PMID 16169070.
- Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514.
- Assmann EM, Alborghetti MR, Camargo ME, Kobarg J (2006). "FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region". J. Biol. Chem. 281 (15): 9869–81. doi:10.1074/jbc.M513280200. PMID 16484223.
- Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569.
- Albert TK, Grote K, Boeing S, et al. (2007). "Global distribution of negative cofactor 2 subunit-alpha on human promoters". Proc. Natl. Acad. Sci. U.S.A. 104 (24): 10000–5. Bibcode:2007PNAS..10410000A. doi:10.1073/pnas.0703490104. PMC 1891239. PMID 17548813.
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